RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SLC22A7Q9Y694 548 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 ZNF407Q9C0G0 2248 aa2.66□□□□□ -1.98
LINC00557-201ENST00000563184 TRAV8-7A0A075B6U6 113 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 IGKV3D-11A0A0A0MRZ8 115 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 IGKV2-24A0A0C4DH68 120 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 H0YC42 278 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 K7EN84 100 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 DHRS3O75911 302 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 NRASP01111 189 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 HRASP01112 189 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 KRASP01116 189 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 ZNF35P13682 527 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 HLA-DMAP28067 261 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 TEAD1P28347 426 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 ATP5J2P56134 94 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 TRDNQ13061 729 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 HSP90AA4PQ58FG1 418 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 SPIN3Q5JUX0 258 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 KCTD16Q68DU8 428 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 CLEC19AQ6UXS0 136 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 OR4D6Q8NGJ1 314 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 ITLN2Q8WWU7 325 aaPredicted RBP2.65□□□□□ -1.99
LINC00557-201ENST00000563184 TVP23CQ96ET8 276 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 TRIM45Q9H8W5 580 aaPredicted RBP2.65□□□□□ -1.99
LINC00557-201ENST00000563184 TMEM38BQ9NVV0 291 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 SLC7A11Q9UPY5 501 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 MIA3Q5JRA6 1907 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 ZSWIM8A7E2V4 1837 aa2.65□□□□□ -1.99
LINC00557-201ENST00000563184 AQRO60306 1485 aaKnown RBP eCLIP2.65□□□□□ -1.99
LINC00557-201ENST00000563184 COL5A1P20908 1838 aaPredicted RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 GOLGA6L4A6NEF3 574 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 TVP23AA6NH52 213 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 SEC14L6B5MCN3 397 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 LIPCP11150 499 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 HRES1P13985 223 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 RPL10AP62906 217 aaKnown RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 IL5RAQ01344 420 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 TOMM34Q15785 309 aaPredicted RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 HNRNPA1L2Q32P51 320 aaKnown RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 TRMT10CQ7L0Y3 403 aaKnown RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 ZNF664Q8N3J9 261 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 ZDHHC22Q8N966 263 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 ZNF555Q8NEP9 628 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 OR4C13Q8NGP0 309 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 SMIM8Q96KF7 97 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 PEBP4Q96S96 227 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 API5Q9BZZ5 524 aaKnown RBP2.64□□□□□ -1.99
LINC00557-201ENST00000563184 VSIRQ9H7M9 311 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 V9GYY9 64 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 NUP205Q92621 2012 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 PLXNB3Q9ULL4 1909 aa2.64□□□□□ -1.99
LINC00557-201ENST00000563184 GATCO43716 136 aaKnown RBP2.63□□□□□ -1.99
LINC00557-201ENST00000563184 KCNK2O95069 426 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 IGHG2P01859 326 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 HTR2CP28335 458 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 PRKCDQ05655 676 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 TAF9Q16594 264 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 CAVIN4Q5BKX8 364 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 APOBEC3HQ6NTF7 200 aaKnown RBP2.63□□□□□ -1.99
LINC00557-201ENST00000563184 CA13Q8N1Q1 262 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 OR52K1Q8NGK4 314 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 MITD1Q8WV92 249 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 METTL26Q96S19 204 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 MRPL20Q9BYC9 149 aaKnown RBP2.63□□□□□ -1.99
LINC00557-201ENST00000563184 SHCBP1LQ9BZQ2 653 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 TM6SF2Q9BZW4 377 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 ASB7Q9H672 318 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 RAB23Q9ULC3 237 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 R4GN34 69 aa2.63□□□□□ -1.99
LINC00557-201ENST00000563184 LTBP4Q8N2S1 1624 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 C4orf51C9J302 202 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 RFXANKO14593 260 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 RNF113AO15541 343 aaKnown RBP2.62□□□□□ -1.99
LINC00557-201ENST00000563184 KLHL2O95198 593 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 CSTAP01040 98 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 RHOCP08134 193 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 TUFMP49411 452 aaKnown RBP2.62□□□□□ -1.99
LINC00557-201ENST00000563184 C6orf183Q5T699 404 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 ZFAND6Q6FIF0 208 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 SLC25A25Q6KCM7 469 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 WDR59Q6PJI9 974 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 FAM231DQ6ZW35 169 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 CYP4Z2PQ8N1L4 340 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 ASCC1Q8N9N2 400 aaKnown RBP2.62□□□□□ -1.99
LINC00557-201ENST00000563184 OR13C9Q8NGT0 318 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 OR8K3Q8NH51 312 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 TM2D3Q9BRN9 247 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 UTP23Q9BRU9 249 aaKnown RBP2.62□□□□□ -1.99
LINC00557-201ENST00000563184 SLC38A1Q9H2H9 487 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 ANKHQ9HCJ1 492 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 ABCB9Q9NP78 766 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 AP3M1Q9Y2T2 418 aa2.62□□□□□ -1.99
LINC00557-201ENST00000563184 TNIKQ9UKE5 1360 aa2.61□□□□□ -1.99
LINC00557-201ENST00000563184 HIVEP2P31629 2446 aa2.61□□□□□ -1.99
LINC00557-201ENST00000563184 SLC5A10A0PJK1 596 aa2.61□□□□□ -1.99
LINC00557-201ENST00000563184 PRMT5O14744 637 aaPredicted RBP2.61□□□□□ -1.99
LINC00557-201ENST00000563184 ELOCQ15369 112 aa2.61□□□□□ -1.99
LINC00557-201ENST00000563184 CLLU1OSQ5K130 101 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms