RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 MRGPRDQ8TDS7 321 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 RHNO1Q9BSD3 238 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 MS4A5Q9H3V2 200 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 ADGRL4Q9HBW9 690 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 SIRT3Q9NTG7 399 aaPredicted RBP5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 COL24A1Q17RW2 1714 aa5.67□□□□□ -1.5
UBQLN1-206ENST00000533705 LIPT2A6NK58 231 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SEC14L6B5MCN3 397 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 PDCD6O75340 191 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZFPL1O95159 310 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 HIST1H1DP16402 221 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MAGEB1P43366 347 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 PSG6Q00889 435 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CD226Q15762 336 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 PLAC9Q5JTB6 97 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ETFRF1Q6IPR1 90 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 TIPARPQ7Z3E1 657 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 HGDQ93099 445 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CHRDL1Q9BU40 450 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SEBOXQ9HB31 216 aaPredicted RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 NTN4Q9HB63 628 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SLC17A5Q9NRA2 495 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 V9GYS6 101 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ECM29Q5VYK3 1845 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CDK5RAP2Q96SN8 1893 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MPZL1O95297 269 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MPGP29372 298 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CNN1P51911 297 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MOGAT3Q86VF5 341 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 WDR31Q8NA23 367 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ABHD3Q8WU67 409 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 YIPF6Q96EC8 236 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 FAAP24Q9BTP7 215 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 TMEM147Q9BVK8 224 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 FBXO8Q9NRD0 319 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 A0A0A6YYJ9 748 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 A0A1W2PN81 502 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 TCRBV16S1A1N1A0A5B0 115 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 C1QBP02746 253 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CHRNA7P36544 502 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 LPAR6P43657 344 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 OR3A1P47881 315 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 LIMK1P53667 647 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SLC37A1P57057 533 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 RHOBP62745 196 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF485Q8NCK3 441 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ASB10Q8WXI3 467 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF764Q96H86 408 aaPredicted RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF275Q9NSD4 429 aaPredicted RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SIRT5Q9NXA8 310 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CLEC5AQ9NY25 188 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 FKBP11Q9NYL4 201 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MRPS18BQ9Y676 258 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 TRIOBPQ9H2D6 2365 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 USP54Q70EL1 1684 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF320A2RRD8 509 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 EPOPA6NHQ4 379 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 FGF2P09038 288 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 OR2B8PP59922 312 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SLC25A30Q5SVS4 291 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MRM1Q6IN84 353 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 H3F3CQ6NXT2 135 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SFTPA2Q8IWL1 248 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 RBPMSQ93062 196 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MED30Q96HR3 178 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 GSX2Q9BZM3 304 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SPAG17Q6Q759 2223 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 LY86O95711 162 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 GP1BAP07359 652 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 FPR2P25090 351 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CALCRP30988 508 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 CD80P33681 288 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 KIR2DS2P43631 304 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SELENOPP49908 381 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 MMP15P51511 669 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 LSM6P62312 80 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNF239Q16600 458 aaKnown RBP5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SP6Q3SY56 376 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 HIKESHIQ53FT3 197 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 THSD4Q6ZMP0 1018 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 C6orf201Q7Z4U5 140 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 OR4F17Q8NGA8 305 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 ZNRF4Q8WWF5 429 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 SLC35D1Q9NTN3 355 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 TINAGQ9UJW2 476 aa5.66□□□□□ -1.5
UBQLN1-206ENST00000533705 UBE2L5PA0A1B0GUS4 154 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CYR61O00622 381 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 CST7O76096 145 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 OPN1MWP04001 364 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 OPN1MW2P0DN77 364 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 OPN1MW3P0DN78 364 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 MLF1P58340 268 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 AVPI1Q5T686 147 aa5.65□□□□□ -1.5
UBQLN1-206ENST00000533705 C1QL3Q5VWW1 255 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms