RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 A0A1W2PRF3 423 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 A0A1W2PRM7 423 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 METTL15A6NJ78 407 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 H3BUX3 64 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 TK1P04183 234 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 HTR1FP30939 366 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 ATP6V1E1P36543 226 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 FUT6P51993 359 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 SRSF4Q08170 494 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 MFGE8Q08431 387 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 TMEM200BQ69YZ2 307 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 PLEKHG7Q6ZR37 379 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 CD177Q8N6Q3 437 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 YIPF7Q8N8F6 280 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 OR13D1Q8NGV5 346 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 FOXRED1Q96CU9 486 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 CADM1Q9BY67 442 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 SEMA6AQ9H2E6 1030 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 PPA2Q9H2U2 334 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 SEBOXQ9HB31 216 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 GPR173Q9NS66 373 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 PITPNC1Q9UKF7 332 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 SLC22A13Q9Y226 551 aa11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 TBL2Q9Y4P3 447 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-227ENST00000508852 TET2Q6N021 2002 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 K7N7A8 449 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 SYT7O43581 403 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 CYB5AP00167 134 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 CDC42P60953 191 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 MEF2CQ06413 473 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 BNIP1Q12981 228 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 HERPUD1Q15011 391 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 CNN3Q15417 329 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 SLC35E4Q6ICL7 350 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 FAM220AQ7Z4H9 259 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 KCTD20Q7Z5Y7 419 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 MKXQ8IYA7 352 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 PP6455Q8WZ26 134 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 IL4I1Q96RQ9 567 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 C19orf12Q9NSK7 152 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 GLS2Q9UI32 602 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 MRM2Q9UI43 246 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 CMYA5Q8N3K9 4069 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 VWFP04275 2813 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
CCHCR1-227ENST00000508852 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 PRR32B1ATL7 298 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 SYNGR1O43759 233 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 CSF1P09603 554 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 C1orf146Q5VVC0 180 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 HCP5Q6MZN7 132 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 ZBTB49Q6ZSB9 765 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 GDPD3Q7L5L3 318 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 CATSPERDQ86XM0 798 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 MALSU1Q96EH3 234 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 BORCS8Q96FH0 119 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 MRPL48Q96GC5 212 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 CENPNQ96H22 339 aaPredicted RBP11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 SNX22Q96L94 193 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 CEP19Q96LK0 163 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 TTTY10Q9BZA0 68 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 ABCB10Q9NRK6 738 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 OR14J1Q9UGF5 321 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
CCHCR1-227ENST00000508852 FAM230AA0A1W2PPH8 454 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 A0A1W2PQL4 384 aaPredicted RBP11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 hADV38S2A0JD32 116 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 C17orf98A8MV24 154 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 MITFO75030 526 aaPredicted RBP11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 RPP14O95059 124 aaKnown RBP11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 TFF1P04155 84 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 ATP1B3P54709 279 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 KRTAP10-3P60369 221 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 ACTC1P68032 377 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 ACTA1P68133 377 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 TMEM244Q5VVB8 128 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 EGFL6Q8IUX8 553 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 OR8H2Q8N162 312 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 PNKDQ8N490 385 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 ASCC1Q8N9N2 400 aaKnown RBP11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 PPP1R14AQ96A00 147 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 ZNF488Q96MN9 340 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 GABARAPL3Q9BY60 117 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 CHST5Q9GZS9 411 aa11.06□□□□□ -0.64
CCHCR1-227ENST00000508852 FAM90A8PA6NJQ4 464 aa11.05□□□□□ -0.64
CCHCR1-227ENST00000508852 CIB2O75838 187 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms