RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A18PA6NE21 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A16PA6NEW6 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A20PA6NIJ5 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A22PA8MWA6 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A12PA8MX19 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A5PA8MXJ8 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 OVOL3O00110 214 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 CLPXO76031 633 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 NCR1O76036 304 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 APOA1P02647 267 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A15PP0C7V4 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A13PP0C7W8 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A14PP0C7W9 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FAM90A24PP0C7X0 464 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 PGA5P0DJD9 388 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 PAX1P15863 534 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 TALDO1P37837 337 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 ART1P52961 327 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FGF12P61328 243 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 SMIM21Q3B7S5 101 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 SLC22A6Q4U2R8 563 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 NHLRC3Q5JS37 347 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 HES5Q5TA89 166 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 CALHM1Q8IU99 346 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 POC1AQ8NBT0 407 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 OR51D1Q8NGF3 324 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 OR5D18Q8NGL1 313 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 DVL3Q92997 716 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 S100A16Q96FQ6 103 aaKnown RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 SPACA5Q96QH8 159 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 NRIP2Q9BQI9 281 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 NUDT16L1Q9BRJ7 211 aaKnown RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 TMEM59Q9BXS4 323 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 BARHL1Q9BZE3 327 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 FGF23Q9GZV9 251 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 PPP1R3EQ9H7J1 279 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-242ENST00000488013 SPACA1Q9HBV2 294 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 C1orf123Q9NWV4 160 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
HDLBP-242ENST00000488013 PLCE1Q9P212 2302 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM14DPA8MWL7 114 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 RGS5O15539 181 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 NDUFA2O43678 99 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 NXPH2O95156 264 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 PLATP00750 562 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 CSF3P09919 207 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 VSIG8P0DPA2 414 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 MUC1P15941 1255 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-242ENST00000488013 CPT2P23786 658 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 CAV3P56539 151 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM33P57088 247 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 IL13RA2Q14627 380 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 P2RY14Q15391 338 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 SPIN3Q5JUX0 258 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 UBE2NLQ5JXB2 153 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 WDR86Q86TI4 376 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 MOGAT3Q86VF5 341 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 LRRC28Q86X40 367 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-242ENST00000488013 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 FAM58AQ8N1B3 248 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 OSR2Q8N2R0 312 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 IGFBPL1Q8WX77 278 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 GTF3AQ92664 365 aaKnown RBP9.33□□□□□ -0.92
HDLBP-242ENST00000488013 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 TIMD4Q96H15 378 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 C6orf62Q9GZU0 229 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-242ENST00000488013 ABCG5Q9H222 651 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 DIABLOQ9NR28 239 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM106BQ9NUM4 274 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 UFSP2Q9NUQ7 469 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 ZNF701Q9NV72 531 aaPredicted RBP9.33□□□□□ -0.92
HDLBP-242ENST00000488013 COMMD3Q9UBI1 195 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 OR5V1Q9UGF6 321 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 PLEKHA6Q9Y2H5 1048 aa9.33□□□□□ -0.92
HDLBP-242ENST00000488013 ROS1P08922 2347 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 TRAV38-1A0A0B4J264 116 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 SMIM30A4D0T7 59 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 SPRY1O43609 319 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-242ENST00000488013 ANGPTL7O43827 346 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 CDC14BO60729 498 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-242ENST00000488013 HTR3BO95264 441 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 KNG1P01042 644 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 LHBP01229 141 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 SLC2A2P11168 524 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-242ENST00000488013 MGMTP16455 207 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 GLRA1P23415 457 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 CLDN12P56749 244 aa9.32□□□□□ -0.92
HDLBP-242ENST00000488013 DSCR9P59020 149 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms