RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PRSS51A0A1B0GVH4 220 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 hADV38S2A0JD32 116 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 NPIPB13A6NJU9 1138 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 HNRNPCL2B2RXH8 293 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 HNRNPCL3B7ZW38 293 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 NPIPB4C9JG80 1138 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 ATP6V0E1O15342 81 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 TPST2O60704 377 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 HNRNPCL1O60812 293 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 SEC31AO94979 1220 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 HNRNPCL4P0DMR1 293 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 CALRP27797 417 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 MAGEA12P43365 314 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 CCT5P48643 541 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 RGS8P57771 180 aaPredicted RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 RPL27P61353 136 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 LSM6P62312 80 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 TXNL4AP83876 142 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 CALCOCO2Q13137 446 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 DIAPH2-AS1Q14236 149 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 EDDM3AQ14507 147 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 UGT3A2Q3SY77 523 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 LINC00114Q6XXX2 140 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 GDPD3Q7L5L3 318 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 SLC22A9Q8IVM8 553 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR6V1Q8N148 313 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 C4orf33Q8N1A6 199 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 LINC00471Q8N535 108 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 TPRX1Q8N7U7 411 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 ASCC1Q8N9N2 400 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR52B4Q8NGK2 314 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR11H2Q8NH07 326 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR52J3Q8NH60 311 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 ACTRT1Q8TDG2 376 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR8B4Q96RC9 309 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 S1PR3Q99500 378 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 RTL8AQ9BWD3 113 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 TRIM31Q9BZY9 425 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 HRH4Q9H3N8 390 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 RERGLQ9H628 205 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 WDR55Q9H6Y2 383 aaPredicted RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 RANGRFQ9HD47 186 aaPredicted RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 MED4Q9NPJ6 270 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 PARP11Q9NR21 331 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 ZIM2Q9NZV7 527 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 OR14J1Q9UGF5 321 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 ZNF107Q9UII5 783 aaPredicted RBP4.77□□□□□ -1.65
HDAC3-206ENST00000471968 SIGLEC7Q9Y286 467 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 IGHV3-72A0A0B4J1Y9 119 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 KIR2DL5BA0A0G2JN68 375 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 KIR2DL5BA0A0G2JPC4 375 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 NBDYA0A0U1RRE5 68 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 A0A1W2PN81 502 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 ANKRD34BA5PLL1 514 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 TMEM210A6NLX4 147 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 ANXA2P2A6NMY6 339 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 H3BQF6 201 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 CHP2O43745 196 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 SOX15O60248 233 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 RENP00797 406 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 SLC2A2P11168 524 aaPredicted RBP4.76□□□□□ -1.65
HDAC3-206ENST00000471968 RPL35AP18077 110 aaKnown RBP4.76□□□□□ -1.65
HDAC3-206ENST00000471968 FUT1P19526 365 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 CHRNA7P36544 502 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 DDOSTP39656 456 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 PRRX1P54821 245 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 TPTEP56180 551 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 HIST1H3AP68431 136 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 DR1Q01658 176 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
HDAC3-206ENST00000471968 RFX4Q33E94 735 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 RNF212Q495C1 297 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 HIST2H3PS2Q5TEC6 136 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 OR52W1Q6IF63 320 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 HIST2H3AQ71DI3 136 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 TRAPPC6BQ86SZ2 158 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 C10orf67Q8IYJ2 551 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 KIR2DL5AQ8N109 375 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 CENPSQ8N2Z9 138 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 Q8N6K4 173 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 FNDC5Q8NAU1 212 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 MINDY2Q8NBR6 621 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 KIR2DL5BQ8NHK3 375 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 PLSCR3Q9NRY6 295 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 ZDHHC18Q9NUE0 388 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 PGPEP1Q9NXJ5 209 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 TMEM216Q9P0N5 145 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 COPS3Q9UNS2 423 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 UBE2J1Q9Y385 318 aaPredicted RBP4.76□□□□□ -1.65
HDAC3-206ENST00000471968 UTP11Q9Y3A2 253 aaKnown RBP4.76□□□□□ -1.65
HDAC3-206ENST00000471968 RHBDD3Q9Y3P4 386 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 N6AMT1Q9Y5N5 214 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 LHFPL6Q9Y693 200 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 LINC00312Q9Y6C7 94 aa4.76□□□□□ -1.65
HDAC3-206ENST00000471968 SELENOKQ9Y6D0 94 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms