RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ODF4Q2M2E3 257 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 C2orf68Q2NKX9 166 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 DNAL1Q4LDG9 190 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 ZNF782Q6ZMW2 699 aaPredicted RBP10.78□□□□□ -0.68
CPSF4-210ENST00000469897 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 CALHM1Q8IU99 346 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 IL4I1Q96RQ9 567 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 ADGRL4Q9HBW9 690 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 KRT84Q9NSB2 600 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 CLN6Q9NWW5 311 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 POLDIP2Q9Y2S7 368 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 SNX5Q9Y5X3 404 aa10.78□□□□□ -0.68
CPSF4-210ENST00000469897 hCG_1809904A0A1W2PP81 198 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 A0A1W2PPE2 198 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 FAM230AA0A1W2PPH8 454 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 A0A1W2PR64 198 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 A0A1W2PRV1 198 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 G3V2T6 193 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 VSIG10L2P0DP72 767 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 ERVK11-1P61568 191 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 AANATQ16613 207 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 PLA1AQ53H76 456 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 SLX4IPQ5VYV7 408 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 NXNL2Q5VZ03 156 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 OR4C13Q8NGP0 309 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 OR2T6Q8NHC8 308 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 TRMT10AQ8TBZ6 339 aaKnown RBP10.77□□□□□ -0.69
CPSF4-210ENST00000469897 TMEM163Q8TC26 289 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 MNTQ99583 582 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 TBX5Q99593 518 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 NKX3-1Q99801 234 aaPredicted RBP10.77□□□□□ -0.69
CPSF4-210ENST00000469897 PRRG3Q9BZD7 231 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 USE1Q9NZ43 259 aa10.77□□□□□ -0.69
CPSF4-210ENST00000469897 MEGF11A6BM72 1044 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 FAM90A8PA6NJQ4 464 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 ZAR1LA6NP61 321 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 F8VVB4 439 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 F8VWA3 439 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 K7N7A8 449 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 CHST1O43916 411 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 MPZP25189 248 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 COL10A1Q03692 680 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 UBE2V2Q15819 145 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 C12orf73Q69YU5 71 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 SSX6Q7RTT6 188 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 DYNAPQ8N1N2 210 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 YIPF7Q8N8F6 280 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 CADM1Q9BY67 442 aaKnown RBP10.76□□□□□ -0.69
CPSF4-210ENST00000469897 MOB1AQ9H8S9 216 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 HES4Q9HCC6 221 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 RAB18Q9NP72 206 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 SLC7A11Q9UPY5 501 aa10.76□□□□□ -0.69
CPSF4-210ENST00000469897 A0A0G2JK05 382 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 G3V4G9 280 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 APOL3O95236 402 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 ARG1P05089 322 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 KRT8P05787 483 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 CHRM2P08172 466 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 POLR2IP36954 125 aaKnown RBP10.75□□□□□ -0.69
CPSF4-210ENST00000469897 DLX6P56179 175 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 EDDM3BP56851 147 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 IL24Q13007 206 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 HABP2Q14520 560 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-210ENST00000469897 KDM4DQ6B0I6 523 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 CCBE1Q6UXH8 406 aaPredicted RBP10.75□□□□□ -0.69
CPSF4-210ENST00000469897 Q6ZSR3 168 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 LYG1Q8N1E2 194 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 ASCC1Q8N9N2 400 aaKnown RBP10.75□□□□□ -0.69
CPSF4-210ENST00000469897 BCAS4Q8TDM0 211 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 CFHR4Q92496 578 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 ADI1Q9BV57 179 aa10.75□□□□□ -0.69
CPSF4-210ENST00000469897 DOCK11Q5JSL3 2073 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 IGKV1-27A0A075B6S5 117 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 A0A1W2PQL4 384 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-210ENST00000469897 METTL15A6NJ78 407 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 SYT7O43581 403 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 CCL1P22362 96 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 FUT6P51993 359 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 FAM189A2Q15884 450 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 ATP6AP1Q15904 470 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 SSX2Q16385 188 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 LDLRAD2Q5SZI1 272 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 C11orf88Q6PI97 169 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 AMIGO2Q86SJ2 522 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 CATSPERDQ86XM0 798 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 ZDHHC13Q8IUH4 622 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 RDH10Q8IZV5 341 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 OR13D1Q8NGV5 346 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 SLAMF9Q96A28 289 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 CEP19Q96LK0 163 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 PKIBQ9C010 78 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 NPFFR1Q9GZQ6 430 aa10.74□□□□□ -0.69
CPSF4-210ENST00000469897 RANBP3Q9H6Z4 567 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-210ENST00000469897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms