RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RAB4BP61018 213 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 CKAP4Q07065 602 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 C2orf80Q0P641 193 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF829Q3KNS6 432 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 FAM90A2PQ658T7 463 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC25A24Q6NUK1 477 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 C5orf46Q6UWT4 87 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 WDR88Q6ZMY6 472 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC74BQ6ZQY2 392 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 MSANTD1Q6ZTZ1 278 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 EIF3MQ7L2H7 374 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 GSTA5Q7RTV2 222 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC16A14Q7RTX9 510 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 HMGN2P46Q86SG4 172 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 TPRA1Q86W33 373 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ZDHHC21Q8IVQ6 265 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 MICU2Q8IYU8 434 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 FAM216BQ8N7L0 139 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC37A3Q8NCC5 494 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC24A4Q8NFF2 622 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 OR4F6Q8NGB9 312 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 OR5H6Q8NGV6 325 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 AKR7LQ8NHP1 331 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 GRPEL2Q8TAA5 225 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 PNPT1Q8TCS8 783 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 UBLCP1Q8WVY7 318 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 MCHR2Q969V1 340 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC25A36Q96CQ1 311 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 FAM120BQ96EK7 910 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 DUS3LQ96G46 650 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 LRR1Q96L50 414 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SDF2Q99470 211 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 NAPGQ99747 312 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ULBP2Q9BZM5 246 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 WFDC10AQ9H1F0 79 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 SLC25A32Q9H2D1 315 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 RIMS4Q9H426 269 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 RHOJQ9H4E5 214 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ARL8BQ9NVJ2 186 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 THUMPD1Q9NXG2 353 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 PSMC3IPQ9P2W1 217 aaPredicted RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 STX18Q9P2W9 335 aaKnown RBP3.67□□□□□ -1.82
SDCBP-205ENST00000447267 DCDC2Q9UHG0 476 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF225Q9UK10 706 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 HILPDAQ9Y5L2 63 aa3.67□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM210A6NLX4 147 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 CLDN24A6NM45 220 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 C12orf71A8MTZ7 269 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 M0R1W7 72 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 WRBO00258 174 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 DNALI1O14645 258 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 GMDSO60547 372 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 PTHP01270 115 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TFF1P04155 84 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SMIM18P0DKX4 95 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 HLA-DOBP13765 273 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 G0S2P27469 103 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 POU1F1P28069 291 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 GSK3BP49841 420 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 GNG10P50151 68 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF84P51523 738 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 CCR9P51686 369 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 RIDAP52758 137 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SLC34A1Q06495 639 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 GPR68Q15743 365 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TRIM16LQ309B1 348 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 GFOD2Q3B7J2 385 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 DNAL1Q4LDG9 190 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 PABPC1L2AQ5JQF8 200 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TEX30Q5JUR7 227 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 C1orf140Q5VVS0 124 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 ANKRD26P1Q6NSI1 321 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 RPS27LQ71UM5 84 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TSEN54Q7Z6J9 526 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM139Q8IV31 216 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 LRRC18Q8N456 261 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 UBL4BQ8N7F7 174 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OR4K5Q8NGD3 323 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OR11L1Q8NGX0 322 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OR6N1Q8NGY5 312 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF671Q8TAW3 534 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 DCAKDQ8WVC6 231 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 RGP1Q92546 391 aaPredicted RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TESCQ96BS2 214 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 NSMCE2Q96MF7 247 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OXGR1Q96P68 337 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 OR4C12Q96R67 309 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 ZNF607Q96SK3 696 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SRSF8Q9BRL6 282 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 SLC25A33Q9BSK2 321 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TAPBPLQ9BX59 468 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 MIEF1Q9NQG6 463 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
SDCBP-205ENST00000447267 TMEM38BQ9NVV0 291 aa3.66□□□□□ -1.82
SDCBP-205ENST00000447267 IFNKQ9P0W0 207 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms