RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ANKRD9Q96BM1 317 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 BSCL2Q96G97 398 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FAHD2AQ96GK7 314 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 OR8B4Q96RC9 309 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 NRTNQ99748 197 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 PDCD10Q9BUL8 212 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 MFFQ9GZY8 342 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CHRNA10Q9GZZ6 450 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CSTL1Q9H114 145 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 S1PR5Q9H228 398 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 C1orf198Q9H425 327 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 C8orf33Q9H7E9 229 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 UCK1Q9HA47 277 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 C12orf4Q9NQ89 552 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 CA10Q9NS85 328 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 C2orf42Q9NWW7 574 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 HRASLS2Q9NWW9 162 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 P4HTMQ9NXG6 502 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 TAS2R3Q9NYW6 316 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 COPS7AQ9UBW8 275 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 MRM2Q9UI43 246 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 FBXL4Q9UKA2 621 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RNF150Q9ULK6 438 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 KCNS2Q9ULS6 477 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 PLCL2Q9UPR0 1127 aa4.31□□□□□ -1.72
LINC00458-202ENST00000427299 RPH3AQ9Y2J0 694 aaPredicted RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 KIAA0100Q14667 2235 aaKnown RBP4.31□□□□□ -1.72
LINC00458-202ENST00000427299 IGKV1D-42A0A075B6H8 117 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 A0A0A6YYC8 382 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 TLCD2A6NGC4 264 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 A6NIN4 97 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR4C45A6NMZ5 311 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF736B4DX44 427 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 D6RAR5 112 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PRAMEF26H0Y7S4 382 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 BLOC1S5-TXNDC5H3BN57 136 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 I3L1I5 382 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PIN1P1O15428 100 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 MAGEB4O15481 346 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR2T1O43869 369 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 RPP14O95059 124 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 AHSA1O95433 338 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 RAB3DO95716 219 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 HLA-AP01891 365 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 AMBPP02760 352 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 MAS1P04201 325 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ANKRD34CP0C6C1 535 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 SLC25A4P12235 298 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 NR2C1P13056 603 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 GP1BBP13224 206 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CTSEP14091 401 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CXCL2P19875 107 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ALOX5APP20292 161 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CXCR1P25024 350 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CD34P28906 385 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 DLSTP36957 453 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 DNASE1L1P49184 302 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 STARP49675 285 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ASCL1P50553 236 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PRKXP51817 358 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 POLR2HP52434 150 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PNRC1Q12796 327 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 MESTQ5EB52 335 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 RNASE10Q5GAN6 216 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 VWA2Q5GFL6 755 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 DEGS2Q6QHC5 323 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ALKAL2Q6UX46 152 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PGAP1Q75T13 922 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PARGQ86W56 976 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 GABRG1Q8N1C3 465 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CIARTQ8N365 385 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 ARL14Q8N4G2 192 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 C12orf45Q8N5I9 185 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 LRRC75AQ8NAA5 344 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 INO80EQ8NBZ0 244 aaPredicted RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 CLEC1AQ8NC01 280 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PXT1Q8NFP0 134 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 STEAP2Q8NFT2 490 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR5T3Q8NGG3 340 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR51L1Q8NGJ5 315 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR2AJ1Q8NGZ0 328 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR6S1Q8NH40 331 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 OR52N5Q8NH56 324 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 COQ8AQ8NI60 647 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 RNF128Q8TEB7 428 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 GPX8Q8TED1 209 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 SLC37A2Q8TED4 501 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 MCHR2Q969V1 340 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 FAM46BQ96A09 425 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 FAM3DQ96BQ1 224 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 SNRNP40Q96DI7 357 aaKnown RBP4.3□□□□□ -1.72
LINC00458-202ENST00000427299 C5orf30Q96GV9 206 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 Q96M85 177 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 SCGB3A2Q96PL1 93 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 TSPAN32Q96QS1 320 aa4.3□□□□□ -1.72
LINC00458-202ENST00000427299 PHB2Q99623 299 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms