RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SRMSQ9H3Y6 488 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 C1orf198Q9H425 327 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM231Q9H6L2 316 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 ADGRL4Q9HBW9 690 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 MYNNQ9NPC7 610 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 KCNJ16Q9NPI9 418 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 MEPEQ9NQ76 525 aaPredicted RBP2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 FAM212BQ9NTI7 297 aaPredicted RBP2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 LYRM2Q9NU23 88 aaPredicted RBP2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 SOHLH2Q9NX45 425 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM161AQ9NX61 479 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 TVP23BQ9NYZ1 205 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF282Q9UDV7 671 aaPredicted RBP2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 VAX2Q9UIW0 290 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 DKKL1Q9UK85 242 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 TSPAN16Q9UKR8 245 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 FLVCR2Q9UPI3 526 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC7A11Q9UPY5 501 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 YARS2Q9Y2Z4 477 aaKnown RBP2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 MEMO1Q9Y316 297 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 HDGFL3Q9Y3E1 203 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 PYGO1Q9Y3Y4 419 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 SNX10Q9Y5X0 201 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 ETV7Q9Y603 341 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMCHD1A6NHR9 2005 aa2.85□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARID2Q68CP9 1835 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 A0A0J9YWU9 116 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 A0A1B0GW64 132 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SERTM2A0A1B0GWG4 89 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 XKRY2A2RUG3 117 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM235A6NFC5 223 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF705GA8MUZ8 300 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 B4DEV8 164 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 UMAD1C9J7I0 102 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 NPIPA7E9PJI5 369 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 K7EPK0 472 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 P2RX6O15547 441 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CYB5BO43169 146 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF208O43345 1280 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TLX2O43763 284 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CRLF1O75462 422 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CA11O75493 328 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDK2AP2O75956 126 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR2J2O76002 312 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 JCHAINP01591 159 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 DCNP07585 359 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SOD3P08294 240 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ANKRD34CP0C6C1 535 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 NBEAP1P0C6P0 100 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LIMS3P0CW19 117 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LIMS4P0CW20 117 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 AKAIN1P0CW23 69 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 NPIPA8P0DM63 369 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CALCBP10092 127 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LAMP1P11279 417 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TDGF1P13385 188 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 FOLR1P15328 257 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 MSR1P21757 451 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 FCARP24071 287 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CXCR1P25024 350 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TLX1P31314 330 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 BRS3P32247 399 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ADRA1AP35348 466 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ALDH3B1P43353 468 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SULT1A2P50226 295 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ST8SIA6P61647 398 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CDK5Q00535 292 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 OC90Q02509 493 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 PAX5Q02548 391 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF616Q08AN1 781 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TAF10Q12962 218 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SCGB2A2Q13296 93 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZBTB6Q15916 424 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LPAL2Q16609 132 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 HLA-BQ31612 363 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 PHLDA2Q53GA4 152 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 COA6Q5JTJ3 125 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 C10orf120Q5SQS8 335 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM69Q5SWH9 247 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 C1orf189Q5VU69 101 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LYSMD4Q5XG99 296 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF770Q6IQ21 691 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPL22L1Q6P5R6 122 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TRIM40Q6P9F5 258 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 PAQR6Q6TCH4 344 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM207Q6UWW9 146 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 BTNL8Q6UX41 500 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF705AQ6ZN79 300 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMIM5Q71RC9 77 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 NUFIP2Q7Z417 695 aaKnown RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 LHFPL4Q7Z7J7 247 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 CENPVQ7Z7K6 275 aaPredicted RBP2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 HOGA1Q86XE5 327 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 WDFY1Q8IWB7 410 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF843Q8N446 348 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 FAM71E2Q8N5Q1 922 aa2.84□□□□□ -1.95
SDCBPP3-201ENST00000419629 THAP8Q8NA92 274 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms