RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 GEMIN2O14893 280 aaKnown RBP16.28■□□□□ 0.2
USP39-202ENST00000409025 RRP8O43159 456 aaKnown RBP16.28■□□□□ 0.2
USP39-202ENST00000409025 TOXO94900 526 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 IL2RAP01589 272 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 OR4E1P0C645 316 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 CHATP28329 748 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 SNU13P55769 128 aaKnown RBP16.28■□□□□ 0.2
USP39-202ENST00000409025 TAS2R46P59540 309 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 ARRDC1Q8N5I2 433 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 ZNF71Q9NQZ8 489 aaPredicted RBP16.28■□□□□ 0.2
USP39-202ENST00000409025 FAM215AQ9Y5M1 114 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 CACNA1GO43497 2377 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 LOC400499M0QZD8 3231 aa16.28■□□□□ 0.2
USP39-202ENST00000409025 IGKV3-15P01624 115 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 OR3A3P47888 321 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 RBM11P57052 281 aaKnown RBP16.27■□□□□ 0.2
USP39-202ENST00000409025 CDK10Q15131 360 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 MKXQ8IYA7 352 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 MUC20Q8N307 709 aaPredicted RBP16.27■□□□□ 0.2
USP39-202ENST00000409025 Q8NFD4 153 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 FAM57AQ8TBR7 257 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 ZFAND1Q8TCF1 268 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 ZNF431Q8TF32 576 aaPredicted RBP16.27■□□□□ 0.2
USP39-202ENST00000409025 FAAP24Q9BTP7 215 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 C1QTNF6Q9BXI9 259 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 OBP2BQ9NPH6 170 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 DLL4Q9NR61 685 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 ZNF701Q9NV72 531 aaPredicted RBP16.27■□□□□ 0.2
USP39-202ENST00000409025 ZNF230Q9UIE0 474 aaPredicted RBP16.27■□□□□ 0.2
USP39-202ENST00000409025 VSIG4Q9Y279 399 aa16.27■□□□□ 0.2
USP39-202ENST00000409025 OR5B21A6NL26 309 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 AGFG2O95081 481 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 NLRC3Q7RTR2 1065 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 BHLHA15Q7RTS1 189 aaPredicted RBP16.27■□□□□ 0.19
USP39-202ENST00000409025 TMEM200AQ86VY9 491 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 SLAMF9Q96A28 289 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 CCDC120Q96HB5 630 aa16.27■□□□□ 0.19
USP39-202ENST00000409025 LILRA1O75019 489 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 HOXD4P09016 255 aaPredicted RBP16.26■□□□□ 0.19
USP39-202ENST00000409025 TIMP3P35625 211 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 NPBWR2P48146 333 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 UCP2P55851 309 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 TSPAN5P62079 268 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 ZNF324BQ6AW86 544 aaPredicted RBP16.26■□□□□ 0.19
USP39-202ENST00000409025 ELP2Q6IA86 826 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 TMEM17Q86X19 198 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 OR10AD1Q8NGE0 317 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 EXTL1Q92935 676 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 MRGPRFQ96AM1 343 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 RADILQ96JH8 1075 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 OR2J1Q9GZK6 312 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 AK3Q9UIJ7 227 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 BOLA1Q9Y3E2 137 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 ASPMQ8IZT6 3477 aa16.26■□□□□ 0.19
USP39-202ENST00000409025 FAM172BPA6NC97 362 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 OR2AT4A6NND4 320 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 BCL3P20749 454 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 CA6P23280 308 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 GNG3P63215 75 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 IFITM2Q01629 132 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 CHRFAM7AQ494W8 412 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 ZNF573Q86YE8 665 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 OR5AP2Q8NGF4 316 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 OR1J1Q8NGS3 322 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 TERB2Q8NHR7 220 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 MAFIPQ8WZ33 124 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 CMSS1Q9BQ75 279 aaKnown RBP16.25■□□□□ 0.19
USP39-202ENST00000409025 SULT4A1Q9BR01 284 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 PLSCR3Q9NRY6 295 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 ZNF581Q9P0T4 197 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 EDARQ9UNE0 448 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A10PA6NDY2 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A18PA6NE21 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A16PA6NEW6 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A20PA6NIJ5 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A8PA6NJQ4 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A7PA6NKC0 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A22PA8MWA6 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A12PA8MX19 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A5PA8MXJ8 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A23PA8MXZ1 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 TRAPPC2LH3BP13 241 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 PDCD6O75340 191 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A15PP0C7V4 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A13PP0C7W8 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A14PP0C7W9 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 FAM90A24PP0C7X0 464 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 RAC2P15153 192 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 UNQ6126/PRO20091Q6UXV3 157 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 SLC25A42Q86VD7 318 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 UXS1Q8NBZ7 420 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 OR2AK2Q8NG84 335 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 SLC25A40Q8TBP6 338 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 HDHD3Q9BSH5 251 aaPredicted RBP16.25■□□□□ 0.19
USP39-202ENST00000409025 CHIAQ9BZP6 476 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 CA10Q9NS85 328 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 AMDHD2Q9Y303 409 aa16.25■□□□□ 0.19
USP39-202ENST00000409025 NOP16Q9Y3C1 178 aaKnown RBP16.25■□□□□ 0.19
USP39-202ENST00000409025 H3BUI4 141 aa16.24■□□□□ 0.19
USP39-202ENST00000409025 GIPP09681 153 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms