RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RNF170Q96K19 258 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 GAFA1Q96PS6 74 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 TEAD3Q99594 435 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PPP1R3EQ9H7J1 279 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PAPOLBQ9NRJ5 636 aaKnown RBP12.73□□□□□ -0.37
DDX55-202ENST00000354291 TVP23BQ9NYZ1 205 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 LRP12Q9Y561 859 aa12.73□□□□□ -0.37
DDX55-202ENST00000354291 VGLL3A8MV65 326 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 ACKR3P25106 362 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 MAP2K3P46734 347 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 GABRA2P47869 451 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 DGCR2P98153 550 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
DDX55-202ENST00000354291 OR8B12Q8NGG6 310 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 LYZL4Q96KX0 146 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 MROQ9BYG7 248 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 PRRG3Q9BZD7 231 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 DNTTIP1Q9H147 329 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 TMEM14AQ9Y6G1 99 aa12.72□□□□□ -0.37
DDX55-202ENST00000354291 A0A0U1RQV5 110 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 TMEM269A0A1B0GVZ9 245 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ZNF254O75437 659 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ACAA1P09110 424 aaPredicted RBP12.71□□□□□ -0.37
DDX55-202ENST00000354291 DCTDP32321 178 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 HCCSP53701 268 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 CAV3P56539 151 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ESRRGP62508 458 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 FAM81AQ8TBF8 368 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 ASB17Q8WXJ9 295 aa12.71□□□□□ -0.37
DDX55-202ENST00000354291 RAB3IPQ96QF0 476 aaPredicted RBP12.71□□□□□ -0.37
DDX55-202ENST00000354291 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
DDX55-202ENST00000354291 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 GSC2O15499 205 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 RHBDL1O75783 438 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 ATP6V1B1P15313 513 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 ROM1Q03395 351 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 SSX2Q16385 188 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 KRT74Q7RTS7 529 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 ZNF679Q8IYX0 411 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 Q8NFD4 153 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 OR5K1Q8NHB7 308 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 ANGPTL6Q8NI99 470 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 UTP4Q969X6 686 aaKnown RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
DDX55-202ENST00000354291 MCRIP2Q9BUT9 160 aaKnown RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 LSM4Q9Y4Z0 139 aaKnown RBP12.7□□□□□ -0.38
DDX55-202ENST00000354291 AKR7A2O43488 359 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 DAPP51397 102 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 GPM6AP51674 278 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 CAPZA1P52907 286 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 GNG3P63215 75 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 ZNF829Q3KNS6 432 aaPredicted RBP12.69□□□□□ -0.38
DDX55-202ENST00000354291 CEACAM21Q3KPI0 293 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 OR4X2Q8NGF9 303 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 ZNF671Q8TAW3 534 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 CADM1Q9BY67 442 aaKnown RBP12.69□□□□□ -0.38
DDX55-202ENST00000354291 PBOV1Q9GZY1 135 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 C19orf12Q9NSK7 152 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 FAM206AQ9NX38 181 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
DDX55-202ENST00000354291 CCDC182A6NF36 153 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 H0YHG0 523 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 PSMD9O00233 223 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 MTRF1O75570 445 aaKnown RBP12.68□□□□□ -0.38
DDX55-202ENST00000354291 MRPL3P09001 348 aaKnown RBP12.68□□□□□ -0.38
DDX55-202ENST00000354291 RASSF2P50749 326 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 RIDAP52758 137 aaKnown RBP12.68□□□□□ -0.38
DDX55-202ENST00000354291 ACTR3P61158 418 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 RIPPLY1Q0D2K3 151 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 C10orf99Q6UWK7 81 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
DDX55-202ENST00000354291 THAP5Q7Z6K1 395 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 COMMD2Q86X83 199 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 OR5A2Q8NGI9 324 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 HPSE2Q8WWQ2 592 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 OR8B4Q96RC9 309 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 PRR25Q96S07 402 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 CNN2Q99439 309 aaKnown RBP12.68□□□□□ -0.38
DDX55-202ENST00000354291 MNTQ99583 582 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 HYDINQ4G0P3 5121 aa12.68□□□□□ -0.38
DDX55-202ENST00000354291 OR5B21A6NL26 309 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 ZNF732B4DXR9 585 aa12.67□□□□□ -0.38
DDX55-202ENST00000354291 G3V2T6 193 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms