RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CACNG8Q8WXS5 425 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SMIM7Q9BQ49 75 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ST6GALNAC5Q9BVH7 336 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 WWTR1Q9GZV5 400 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HMX2A2RU54 273 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 RPLP1P05386 114 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 ALOX5APP20292 161 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 IGFBP4P22692 258 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 C2orf76Q3KRA6 126 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 MRPL54Q6P161 138 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 ALKBH3Q96Q83 286 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 SELENOIQ9C0D9 397 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HRASLSQ9HDD0 168 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR1A1Q9P1Q5 309 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 GNG12Q9UBI6 72 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 GPR52Q9Y2T5 361 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ANKRD20A5PA0PJZ0 165 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ICMTO60725 284 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PNPP00491 289 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 CCNOP22674 350 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 NDUFA6P56556 154 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 RPS18P62269 152 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 HABP2Q14520 560 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 SLC9A3R2Q15599 337 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 CALHM1Q8IU99 346 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR2T6Q8NHC8 308 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 TMEM40Q8WWA1 233 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PACRGQ96M98 296 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 TAAR9Q96RI9 348 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 GABRG3Q99928 467 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PLSCR2Q9NRY7 297 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 A0A1W2PNV4 684 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SOX4Q06945 474 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 KIAA0040Q15053 153 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 LILRA2Q8N149 483 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ZMYND19Q96E35 227 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 PTPN18Q99952 460 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SGIP1Q9BQI5 828 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 MPC2O95563 127 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HIST1H1CP16403 213 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 USF1P22415 310 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 SULT1A1P50225 295 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SLC25A40Q8TBP6 338 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 FAAP24Q9BTP7 215 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR2S2Q9NQN1 319 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 NAT8BQ9UHF3 227 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ADAMTS9Q9P2N4 1935 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 RNFT1Q5M7Z0 435 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 UBE3DQ7Z6J8 389 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 BCORP1Q8N888 145 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 RNF186Q9NXI6 227 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 ANXA10Q9UJ72 324 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 LOC107986453A0A1B0GWG9 222 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 KLF7O75840 302 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 CRISP2P16562 243 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PPP2CAP67775 309 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 RPL24P83731 157 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 IKZF1Q13422 519 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 AMIGO3Q86WK7 504 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SLC16A11Q8NCK7 471 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 DERL3Q96Q80 235 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 TECRQ9NZ01 308 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 USP36Q9P275 1121 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR2W1Q9Y3N9 320 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PCNX2A6NKB5 2137 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 AHCTF1Q8WYP5 2266 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 CT83Q5H943 113 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 TMPRSS7Q7RTY8 843 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 BOCQ9BWV1 1114 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 IL36GQ9NZH8 169 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 FBXL17Q9UF56 701 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PSMD9O00233 223 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 PDCD6O75340 191 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 CRYBB2P43320 205 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HNRNPA3P51991 378 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 CXorf36Q9H7Y0 433 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 TRBV5-3A0A0A0MS03 114 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 FXYD1O00168 92 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 GABRR1P24046 479 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 SOX2P48431 317 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 KISS1Q15726 138 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 MRM1Q6IN84 353 aaKnown RBP3.59□□□□□ -1.84
USH2A-201ENST00000307340 PAQR9Q6ZVX9 377 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 CBLN2Q8IUK8 224 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 SCAMP4Q969E2 229 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 UBE2FQ969M7 185 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 FAM122AQ96E09 287 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 TMEM147Q9BVK8 224 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 PRDM14Q9GZV8 571 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 TMEM30AQ9NV96 361 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 ZNF225Q9UK10 706 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 TIMM8AO60220 97 aaPredicted RBP3.59□□□□□ -1.84
USH2A-201ENST00000307340 GPRIN1Q7Z2K8 1008 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 TMIGD2Q96BF3 282 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 ELF5Q9UKW6 265 aaPredicted RBP3.59□□□□□ -1.84
USH2A-201ENST00000307340 PHF3Q92576 2039 aaKnown RBP3.59□□□□□ -1.84
USH2A-201ENST00000307340 TRAV38-1A0A0B4J264 116 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 A0A1B0GV72 72 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 FNDC10F2Z333 226 aa3.59□□□□□ -1.84
USH2A-201ENST00000307340 CHEK1O14757 476 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms