RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SLC26A1Q9H2B4 701 aa10.29□□□□□ -0.76
LAMA4-201ENST00000230538 AMMECR1Q9Y4X0 333 aaPredicted RBP10.29□□□□□ -0.76
LAMA4-201ENST00000230538 IGHV3-43A0A0B4J1X8 118 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 PHOX2AO14813 284 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 CTAG2O75638 210 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 IGHV3-43DP0DP04 118 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 CSF2RBP32927 897 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 ACER2Q5QJU3 275 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 OR5D13Q8NGL4 314 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 RFESDQ8TAC1 157 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 TM4SF19Q96DZ7 209 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 SLC45A2Q9UMX9 530 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 MEX3AA1L020 520 aaKnown RBP10.28□□□□□ -0.76
LAMA4-201ENST00000230538 TBX19O60806 448 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 GP1BAP07359 652 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 ANKRD34CP0C6C1 535 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 GALP22466 123 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 SPNS3Q6ZMD2 512 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 MSRB3Q8IXL7 192 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 OR5C1Q8NGR4 320 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 IGHA1P01876 353 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 IGHA2P01877 340 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 CCL2P13500 99 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 FABP4P15090 132 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
LAMA4-201ENST00000230538 PRRX1P54821 245 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 PPP1CAP62136 330 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 CA5BP1Q8WTZ4 195 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 TOLLIPQ9H0E2 274 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 PLPP3O14495 311 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 SSX1Q16384 188 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 NAA60Q9H7X0 242 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 NAT8BQ9UHF3 227 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 IGLV3-16A0A075B6K0 115 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 TEX50A0A1B0GTY4 177 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 F5H697 171 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 LYZL6O75951 148 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 ZFPL1O95159 310 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 FNDC7Q5VTL7 733 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 LINC01555Q8NAE3 123 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 SEBOXQ9HB31 216 aaPredicted RBP10.28□□□□□ -0.76
LAMA4-201ENST00000230538 DCAF16Q9NXF7 216 aa10.28□□□□□ -0.76
LAMA4-201ENST00000230538 A0A1B0GTH9 108 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 OR2M5A3KFT3 312 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 SPINK4O60575 86 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 LY86O95711 162 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 MPLP40238 635 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.76
LAMA4-201ENST00000230538 MUC20Q8N307 709 aaPredicted RBP10.27□□□□□ -0.76
LAMA4-201ENST00000230538 OR5V1Q9UGF6 321 aa10.27□□□□□ -0.76
LAMA4-201ENST00000230538 IGHV1OR21-1A0A087WYE8 117 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 K7EQS6 105 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 ZNF737O75373 536 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 COX7A1P24310 79 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 MTFP1Q9UDX5 166 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
LAMA4-201ENST00000230538 DHRS2Q13268 280 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CLLU1Q5K131 121 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 TMEM108Q6UXF1 575 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 NHLRC1Q6VVB1 395 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 NPEPL1Q8NDH3 523 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 DEFB124Q8NES8 71 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CXXC4Q9H2H0 198 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 IL36GQ9NZH8 169 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CACNG5Q9UF02 275 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 A0A1W2PN81 502 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 SP1P08047 785 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CHRNA7P36544 502 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CDKN2AP42771 156 aaKnown RBP10.27□□□□□ -0.77
LAMA4-201ENST00000230538 RPEL1Q2QD12 228 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 OR6S1Q8NH40 331 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 KCNK15Q9H427 330 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CNTD2Q9H8S5 307 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 ZFP64Q9NPA5 681 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.77
LAMA4-201ENST00000230538 ARID1BQ8NFD5 2236 aaPredicted RBP10.27□□□□□ -0.77
LAMA4-201ENST00000230538 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 CBY3A6NI87 242 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 DNASE2O00115 360 aaPredicted RBP10.27□□□□□ -0.77
LAMA4-201ENST00000230538 HIST1H3AP68431 136 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 GPBAR1Q8TDU6 330 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
LAMA4-201ENST00000230538 OR5AC1P0C628 307 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 RAB32Q13637 225 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 ETFDHQ16134 617 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 GGNBP1Q5YKI7 109 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 DEGS2Q6QHC5 323 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 SDK1Q7Z5N4 2213 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 TGIF2LXQ8IUE1 241 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 TMEM37Q8WXS4 190 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 MAP6Q96JE9 813 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 DOK5Q9P104 306 aa10.26□□□□□ -0.77
LAMA4-201ENST00000230538 WSB1Q9Y6I7 421 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms