RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NAT1P18440 290 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 KITLGP21583 273 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ANOS1P23352 680 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 DTYMKP23919 212 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 GIFP27352 417 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 BLVRBP30043 206 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 GCH1P30793 250 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 BTCP35070 178 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ECI1P42126 302 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 SRP9P49458 86 aaKnown RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 MECP2P51608 486 aaKnown RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 TAS2R46P59540 309 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 SELENOVP59797 346 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 IL24Q13007 206 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 PLA2G7Q13093 441 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ARFRP1Q13795 201 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 TATDN3Q17R31 274 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 C11orf91Q3C1V1 193 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 RNASE12Q5GAN4 147 aaKnown RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 RNASE10Q5GAN6 216 aaKnown RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 METTL11BQ5VVY1 283 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 MBNL2Q5VZF2 373 aaKnown RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ZNF474Q6S9Z5 364 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ZNF782Q6ZMW2 699 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 TRAPPC6BQ86SZ2 158 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 FJX1Q86VR8 437 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 TMEM17Q86X19 198 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 CELF2-AS1Q8N7Q2 184 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ZNF611Q8N823 705 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 TMEM104Q8NE00 496 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 OR8S1Q8NH09 359 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 OR51F2Q8NH61 342 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 CCDC107Q8WV48 283 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 SCGB3A2Q96PL1 93 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 NEURL2Q9BR09 285 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 MMP28Q9H239 520 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 PRORYQ9H606 182 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 GPN1Q9HCN4 374 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-215ENST00000641371 ASF1BQ9NVP2 202 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 MCUBQ9NWR8 336 aa8.36□□□□□ -1.07
PHGDH-215ENST00000641371 NCOR2Q9Y618 2525 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 IGHV2OR16-5A0A0B4J2B6 119 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 A0A1B0GUH1 482 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 TMEM235A6NFC5 223 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 FOXI3A8MTJ6 420 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-215ENST00000641371 VSTM5A8MXK1 200 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 ZNF732B4DXR9 585 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 EEF1E1-BLOC1S5C9J1V9 151 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 C16orf97H3BN30 126 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 J3QT63 122 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 IL5P05113 134 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 FGF12P61328 243 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 NAAAQ02083 359 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 IL13RA2Q14627 380 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 MOGAT2Q3SYC2 334 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 VAX1Q5SQQ9 334 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 FIP1L1Q6UN15 594 aaKnown RBP8.35□□□□□ -1.07
PHGDH-215ENST00000641371 BIVMQ86UB2 503 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 LIX1LQ8IVB5 337 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 ARRDC1Q8N5I2 433 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 NAXEQ8NCW5 288 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 OR5D18Q8NGL1 313 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 OR4C16Q8NGL9 310 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 SLC25A40Q8TBP6 338 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 ST8SIA4Q92187 359 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 UPRTQ96BW1 309 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 CMBLQ96DG6 245 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 RNF170Q96K19 258 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 C20orf85Q9H1P6 137 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 RIMS4Q9H426 269 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-215ENST00000641371 KCNK15Q9H427 330 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 BANF2Q9H503 90 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 TMEM100Q9NV29 134 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 NUDT15Q9NV35 164 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 PLEKHJ1Q9NW61 149 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 GPR160Q9UJ42 338 aa8.35□□□□□ -1.07
PHGDH-215ENST00000641371 MAP1BP46821 2468 aaKnown RBP8.35□□□□□ -1.07
PHGDH-215ENST00000641371 IGKV1-27A0A075B6S5 117 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 IGHV1-18A0A0C4DH31 117 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 A0A0G2JNJ9 132 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 SOCS1O15524 211 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 SSX4O60224 188 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 PDCD6O75340 191 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 MT-ND4P03905 459 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 IFNA6P05013 189 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 GNB3P16520 340 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 BMP5P22003 454 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 PTAFRP25105 342 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 GLRXP35754 106 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 CA7P43166 264 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 HAAOP46952 286 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 GPM6AP51674 278 aa8.34□□□□□ -1.07
PHGDH-215ENST00000641371 RBM11P57052 281 aaKnown RBP8.34□□□□□ -1.07
PHGDH-215ENST00000641371 HLXQ14774 488 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms