RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SELLP14151 372 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 IGLL1P15814 213 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 TGM4P49221 684 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 RIDAP52758 137 aaKnown RBP14.07□□□□□ -0.16
RETREG3-210ENST00000590541 ZBTB37Q5TC79 503 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 C12orf73Q69YU5 71 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 HCP5Q6MZN7 132 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 WDR82Q6UXN9 313 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 GID4Q8IVV7 300 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 FAM81AQ8TBF8 368 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 TMEM163Q8TC26 289 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 OR5P3Q8WZ94 311 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 WWC2-AS2Q96NR7 200 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 HIST1H2AAQ96QV6 131 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 OR8B4Q96RC9 309 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 FAM234AQ9H0X4 552 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 SERTAD4Q9NUC0 356 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 HAO2Q9NYQ3 351 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 KLHDC2Q9Y2U9 406 aa14.07□□□□□ -0.16
RETREG3-210ENST00000590541 PRKYO43930 277 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 ACKR3P25106 362 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 PAX6P26367 422 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 PRDX4Q13162 271 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 HABP2Q14520 560 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 LRRC75BQ2VPJ9 315 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 NCR3LG1Q68D85 454 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 ZDHHC23Q8IYP9 409 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 WFDC9Q8NEX5 89 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 OR51G2Q8NGK0 314 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 H1FXQ92522 213 aaKnown RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 CENPNQ96H22 339 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 LYZL4Q96KX0 146 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 CITED2Q99967 270 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 NPFFR1Q9GZQ6 430 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 DNTTIP1Q9H147 329 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 METTL8Q9H825 291 aaKnown RBP14.06□□□□□ -0.16
RETREG3-210ENST00000590541 MOB1AQ9H8S9 216 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 ZNF702PQ9H963 129 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 RAB18Q9NP72 206 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 FAM206AQ9NX38 181 aa14.06□□□□□ -0.16
RETREG3-210ENST00000590541 ZNF850A8MQ14 1090 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 M0R1W7 72 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 MTRF1O75570 445 aaKnown RBP14.05□□□□□ -0.16
RETREG3-210ENST00000590541 HCCSP53701 268 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 CSNK2BP67870 215 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 LRRC10Q5BKY1 277 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 ATPAF1Q5TC12 328 aaPredicted RBP14.05□□□□□ -0.16
RETREG3-210ENST00000590541 AADACL4Q5VUY2 407 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 TCEANCQ8N8B7 351 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 OR5T2Q8NGG2 359 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 PIFOQ8TCI5 191 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 PIGCQ92535 297 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 RNF170Q96K19 258 aa14.05□□□□□ -0.16
RETREG3-210ENST00000590541 NUFIP1Q9UHK0 495 aaKnown RBP14.05□□□□□ -0.16
RETREG3-210ENST00000590541 CDIPTO14735 213 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 MRPL3P09001 348 aaKnown RBP14.04□□□□□ -0.16
RETREG3-210ENST00000590541 RIPPLY1Q0D2K3 151 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 AANATQ16613 207 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 CEACAM21Q3KPI0 293 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 DEFB121Q5J5C9 76 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 STUMQ69YW2 141 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 THAP5Q7Z6K1 395 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 AMIGO2Q86SJ2 522 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 NKX3-1Q99801 234 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-210ENST00000590541 PBOV1Q9GZY1 135 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 CLN6Q9NWW5 311 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 WARS2Q9UGM6 360 aaKnown RBP14.04□□□□□ -0.16
RETREG3-210ENST00000590541 IKZF2Q9UKS7 526 aa14.04□□□□□ -0.16
RETREG3-210ENST00000590541 SF3B6Q9Y3B4 125 aaKnown RBP14.04□□□□□ -0.16
RETREG3-210ENST00000590541 OR5B21A6NL26 309 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 ZNF670-ZNF695F2Z2N8 137 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 MITFO75030 526 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-210ENST00000590541 IGLV3-1P01715 115 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 CD33P20138 364 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 BMXP51813 675 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 CXCR4P61073 352 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 GNG3P63215 75 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 TMED1Q13445 227 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 ZNF322Q6U7Q0 402 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-210ENST00000590541 KCTD8Q6ZWB6 473 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 COMMD2Q86X83 199 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 SLC35F2Q8IXU6 374 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 C10orf67Q8IYJ2 551 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 Q8N2B8 174 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 DTX3Q8N9I9 347 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 MED30Q96HR3 178 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 CIB1Q99828 191 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 GABARAPL3Q9BY60 117 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 ADGRL4Q9HBW9 690 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 COPS3Q9UNS2 423 aa14.03□□□□□ -0.16
RETREG3-210ENST00000590541 WI2-2373I1.2A0A1W2PRP0 233 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 DHRS7CA6NNS2 312 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 LOC110117498-PIK3R3F6TDL0 507 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 DHRS3O75911 302 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 TFF1P04155 84 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 EPHA2P29317 976 aa14.02□□□□□ -0.17
RETREG3-210ENST00000590541 KRTAP10-11P60412 298 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms