RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GNG3P63215 75 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 PPA1Q15181 289 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 DMRTC1Q5HYR2 192 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 OR2T2Q6IF00 324 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 MYPOPQ86VE0 399 aaPredicted RBP11.84□□□□□ -0.51
TPM1-215ENST00000558868 ZNF573Q86YE8 665 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 CADM3Q8N126 398 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 SLC25A40Q8TBP6 338 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 CHAC2Q8WUX2 184 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 RNF170Q96K19 258 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 OR2J1Q9GZK6 312 aa11.84□□□□□ -0.51
TPM1-215ENST00000558868 IGHV2OR16-5A0A0B4J2B6 119 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 TMEM235A6NFC5 223 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 ZNF732B4DXR9 585 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 INMT-MINDY4F8WBC2 141 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 C16orf97H3BN30 126 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 H3BUI4 141 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 SPRY1O43609 319 aaPredicted RBP11.83□□□□□ -0.52
TPM1-215ENST00000558868 DHFRP00374 187 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 MT-ND4P03905 459 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 TCRBP04435 133 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 GIFP27352 417 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 BTCP35070 178 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 RAG2P55895 527 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 GUCA2AQ02747 115 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 SPATA46Q5T0L3 261 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 BTN2A1Q7KYR7 527 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 FJX1Q86VR8 437 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 OSR2Q8N2R0 312 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 OR10K1Q8NGX5 313 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 Q96M66 194 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 NICN1Q9BSH3 213 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 RTL8AQ9BWD3 113 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 JKAMPQ9P055 326 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 SH3BGRL2Q9UJC5 107 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 PIEZO2Q9H5I5 2752 aa11.83□□□□□ -0.52
TPM1-215ENST00000558868 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.82□□□□□ -0.52
TPM1-215ENST00000558868 A0A1W2PP11 408 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 SERPINE3A8MV23 424 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 SOCS1O15524 211 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 ANGPTL7O43827 346 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 PLATP00750 562 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 CRYAAP02489 173 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 GNB3P16520 340 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 TBPP20226 339 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
TPM1-215ENST00000558868 GCH1P30793 250 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 ZNF83P51522 516 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 GPM6AP51674 278 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 NAAAQ02083 359 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 AGAP6Q5VW22 663 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 STEAP1BQ6NZ63 245 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 TRAPPC6BQ86SZ2 158 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 BHLHE23Q8NDY6 225 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 OR8S1Q8NH09 359 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 KLF14Q8TD94 323 aaPredicted RBP11.82□□□□□ -0.52
TPM1-215ENST00000558868 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 MARS2Q96GW9 593 aaKnown RBP11.82□□□□□ -0.52
TPM1-215ENST00000558868 CCDC120Q96HB5 630 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 DMRTA2Q96SC8 542 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 PKIBQ9C010 78 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 RHOFQ9HBH0 211 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 MCUBQ9NWR8 336 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 NKIRAS2Q9NYR9 191 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 MEMO1Q9Y316 297 aa11.82□□□□□ -0.52
TPM1-215ENST00000558868 TRGV8A0A0C4DH27 118 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A10PA6NDY2 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A18PA6NE21 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A16PA6NEW6 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A20PA6NIJ5 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A8PA6NJQ4 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A7PA6NKC0 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FOXI3A8MTJ6 420 aaPredicted RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A22PA8MWA6 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A12PA8MX19 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A5PA8MXJ8 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A23PA8MXZ1 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 ZNF736B4DX44 427 aaPredicted RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 M0R1B8 84 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 MFNGO00587 321 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 TPD52L2O43399 206 aaKnown RBP11.81□□□□□ -0.52
TPM1-215ENST00000558868 H2AFB2P0C5Z0 115 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A15PP0C7V4 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A13PP0C7W8 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A14PP0C7W9 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 FAM90A24PP0C7X0 464 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 TRAPPC2P0DI81 140 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 TRAPPC2BP0DI82 140 aa11.81□□□□□ -0.52
TPM1-215ENST00000558868 PPP3CBP16298 524 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms