RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TMEM218A2RU14 115 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 NTN3O00634 580 aaPredicted RBP20.32■□□□□ 0.84
FOXA1-202ENST00000545425 TOR1AO14656 332 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 SRD5A2P31213 254 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 ASCL4Q6XD76 172 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 TMEM156Q8N614 296 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 CPT1CQ8TCG5 803 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 ZNF385AQ96PM9 386 aaKnown RBP20.32■□□□□ 0.84
FOXA1-202ENST00000545425 RBM24Q9BX46 236 aaKnown RBP20.32■□□□□ 0.84
FOXA1-202ENST00000545425 NKX6-2Q9C056 277 aaPredicted RBP20.32■□□□□ 0.84
FOXA1-202ENST00000545425 PROK2Q9HC23 129 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 ZFP57Q9NU63 452 aa20.32■□□□□ 0.84
FOXA1-202ENST00000545425 ATG12O94817 140 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 FTH1P19P0C7X4 201 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 CCL3P10147 92 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 ICAM2P13598 275 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 SERPINA2P20848 420 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 SLC9A3R2Q15599 337 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 ANKRD55Q3KP44 614 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 PHYHD1Q5SRE7 291 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 LHFPL2Q6ZUX7 228 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 WASF3Q9UPY6 502 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 MRPS18CQ9Y3D5 142 aaKnown RBP20.31■□□□□ 0.84
FOXA1-202ENST00000545425 HS3ST3B1Q9Y662 390 aa20.31■□□□□ 0.84
FOXA1-202ENST00000545425 OR5H15A6NDH6 313 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 FAHP16930 419 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 RSPO1Q2MKA7 263 aaPredicted RBP20.3■□□□□ 0.84
FOXA1-202ENST00000545425 KRTAP27-1Q3LI81 207 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 NKAPLQ5M9Q1 402 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 SGPP2Q8IWX5 399 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 ZIC4Q8N9L1 334 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 OR1S2Q8NGQ3 325 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 PLEKHJ1Q9NW61 149 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 IL36GQ9NZH8 169 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 NSG1A0A0A6YYJ2 146 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 H0YIZ8 118 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 KLF7O75840 302 aaPredicted RBP20.3■□□□□ 0.84
FOXA1-202ENST00000545425 IFNA21P01568 189 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 SERPINA5P05154 406 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 PMELP40967 661 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 PCBD1P61457 104 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 ZFP36L1Q07352 338 aaKnown RBP20.3■□□□□ 0.84
FOXA1-202ENST00000545425 C10orf91Q5T1B1 145 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 RIPPLY2Q5TAB7 128 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 UNQ6126/PRO20091Q6UXV3 157 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 CLRN3Q8NCR9 226 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 LIN37Q96GY3 246 aaPredicted RBP20.3■□□□□ 0.84
FOXA1-202ENST00000545425 ASF1BQ9NVP2 202 aa20.3■□□□□ 0.84
FOXA1-202ENST00000545425 E9PLN8 166 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 DNASE2O00115 360 aaPredicted RBP20.29■□□□□ 0.84
FOXA1-202ENST00000545425 SGCEO43556 437 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 FOLR3P41439 243 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 SMCO1Q147U7 214 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 C1QL2Q7Z5L3 287 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 RTN4RL2Q86UN3 420 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 SGK3Q96BR1 496 aa20.29■□□□□ 0.84
FOXA1-202ENST00000545425 CARHSP1Q9Y2V2 147 aaKnown RBP20.29■□□□□ 0.84
FOXA1-202ENST00000545425 GAPDHP04406 335 aaKnown RBP20.28■□□□□ 0.84
FOXA1-202ENST00000545425 KLK2P20151 261 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 DEFA5Q01523 94 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 ZNF169Q14929 603 aaPredicted RBP20.28■□□□□ 0.84
FOXA1-202ENST00000545425 ZNF585AQ6P3V2 769 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 GALNTL5Q7Z4T8 443 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 GNRHR2Q96P88 292 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 SCNM1Q9BWG6 230 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 MS4A7Q9GZW8 240 aaPredicted RBP20.28■□□□□ 0.84
FOXA1-202ENST00000545425 ANXA10Q9UJ72 324 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 TUBD1Q9UJT1 453 aa20.28■□□□□ 0.84
FOXA1-202ENST00000545425 A0A0J9YW62 118 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 SYNGR3O43761 229 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 MTCP1P56278 107 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 CHAF1BQ13112 559 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 NRN1LQ496H8 165 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 PABPC1L2AQ5JQF8 200 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 PDSS1Q5T2R2 415 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 OR1F12Q8NHA8 337 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 ADAMTS17Q8TE56 1095 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 RRNAD1Q96FB5 475 aaKnown RBP20.27■□□□□ 0.84
FOXA1-202ENST00000545425 SLC5A7Q9GZV3 580 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 NECAP2Q9NVZ3 263 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 LPAR3Q9UBY5 353 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 POMT1Q9Y6A1 747 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 CRYM-AS1A6NIL9 109 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 ADAP1O75689 374 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 GLRA1P23415 457 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 TMEM42Q69YG0 159 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 SPAG16Q8N0X2 631 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 FNDC9Q8TBE3 224 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 FBXO17Q96EF6 278 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 NARS2Q96I59 477 aaKnown RBP20.27■□□□□ 0.84
FOXA1-202ENST00000545425 CNTNAP3BQ96NU0 1288 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 CNTNAP3Q9BZ76 1288 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 ELL3Q9HB65 397 aaPredicted RBP20.27■□□□□ 0.84
FOXA1-202ENST00000545425 TMEM38BQ9NVV0 291 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 SLC39A1Q9NY26 324 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 ZNF629Q9UEG4 869 aaPredicted RBP20.27■□□□□ 0.84
FOXA1-202ENST00000545425 ATPIF1Q9UII2 106 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 PURGQ9UJV8 347 aaKnown RBP20.27■□□□□ 0.84
FOXA1-202ENST00000545425 KCNIP3Q9Y2W7 256 aa20.27■□□□□ 0.84
FOXA1-202ENST00000545425 CEP295Q9C0D2 2601 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms