RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 LBX1P52954 281 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PNLIPRP2P54317 469 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SNU13P55769 128 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TBPL1P62380 186 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PITX1P78337 314 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RHOGP84095 191 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SP4Q02446 784 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF763Q0D2J5 394 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF154Q13106 437 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SNRNP35Q16560 246 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ODF4Q2M2E3 257 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 C2orf68Q2NKX9 166 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PDLIM3Q53GG5 364 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 XKR7Q5GH72 579 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TFDP3Q5H9I0 405 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 GCSAMLQ5JQS6 135 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ELFN2Q5R3F8 820 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 HENMT1Q5T8I9 393 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SDHAF4Q5VUM1 108 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 C22orf42Q6IC83 251 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LAIR2Q6ISS4 152 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CNIH2Q6PI25 160 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TBPL2Q6SJ96 375 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 B3GLCTQ6Y288 498 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 FRRS1Q6ZNA5 592 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TRMT1LQ7Z2T5 733 aaKnown RBP4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 GLT6D1Q7Z4J2 308 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 C5orf24Q7Z6I8 188 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 RTN4RL2Q86UN3 420 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CMTM8Q8IZV2 173 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 BATF2Q8N1L9 274 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 EID2Q8N6I1 236 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PLPP5Q8NEB5 264 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR10G3Q8NGC4 313 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR4D9Q8NGE8 314 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR5AP2Q8NGF4 316 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CNIH3Q8TBE1 160 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CASTOR1Q8WTX7 329 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 UBTD2Q8WUN7 234 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 DNASE2BQ8WZ79 361 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 C16orf58Q96GQ5 468 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 DEFB118Q96PH6 123 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR4K3Q96R72 315 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 MGLLQ99685 303 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H2BLQ99880 126 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 CACNG6Q9BXT2 260 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC25A31Q9H0C2 315 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 PLK3Q9H4B4 646 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SMDT1Q9H4I9 107 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TMEM27Q9HBJ8 222 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 LTB4R2Q9NPC1 389 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SIX2Q9NPC8 291 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 SLC17A5Q9NRA2 495 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 GPR83Q9NYM4 423 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR5AC2Q9NZP5 309 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 C1RLQ9NZP8 487 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 B3GAT1Q9P2W7 334 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF391Q9UJN7 358 aa4.02□□□□□ -1.77
HMGB3P13-201ENST00000511263 TRPM7Q96QT4 1865 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NOTCH4Q99466 2003 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 FXYD6-FXYD2A0A087WZ82 144 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TRBV2A0A0J9YWF9 115 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 IRGMA1A4Y4 181 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR2M5A3KFT3 312 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 C7orf77A4D0Y5 90 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR6C6A6NF89 314 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 FAM159BA6NKW6 160 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR2AG2A6NM03 316 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 C17orf105B2RV13 164 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 F5H5P2 479 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 G3V3Y1 287 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 J3QR06 171 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 APOC4-APOC2K7ER74 178 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CYB561D2O14569 222 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 EIF4E2O60573 245 aaKnown RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SAP30O75446 220 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SCGNO76038 276 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TOXO94900 526 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SCELO95171 688 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TIMP1P01033 207 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR5G3P0C626 314 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SFTA3P0C7M3 94 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CT45A8P0DMV1 189 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CT45A9P0DMV2 189 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OR13C7P0DN81 318 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 UROSP10746 265 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 BCKDHAP12694 445 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 AKR1C4P17516 323 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 OMGP23515 440 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 CYP2F1P24903 491 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 NFYBP25208 207 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 PSMB5P28074 263 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 SHC1P29353 583 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 GABRA2P47869 451 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 ZNF140P52738 457 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 DVL1P1P54792 670 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 TAS2R19P59542 299 aa4.01□□□□□ -1.77
HMGB3P13-201ENST00000511263 HIST1H3AP68431 136 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms