RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SPSB4Q96A44 273 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 PGAM5Q96HS1 289 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 NSL1Q96IY1 281 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 RNF170Q96K19 258 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 SNX22Q96L94 193 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 C8orf49Q96NF6 230 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 INTS14Q96SY0 518 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 FEVQ99581 238 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 CITED1Q99966 193 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 RBM4BQ9BQ04 359 aaKnown RBP3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 PAPOLGQ9BWT3 736 aaKnown RBP3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 DGCR6LQ9BY27 220 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 REEP1Q9H902 201 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 RNPEPL1Q9HAU8 725 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 ELL3Q9HB65 397 aaPredicted RBP3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 HAO2Q9NYQ3 351 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 FAM30AQ9NZY2 134 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 KIF17Q9P2E2 1029 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 KAAG1Q9UBP8 84 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 PRPF19Q9UMS4 504 aaKnown RBP3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 BAIAP2Q9UQB8 552 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 KLHDC2Q9Y2U9 406 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 ARL2BPQ9Y2Y0 163 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 SIGLEC9Q9Y336 463 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 FAM96BQ9Y3D0 163 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 POMT1Q9Y6A1 747 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 NOTCH3Q9UM47 2321 aa3.84□□□□□ -1.79
GTF3C3-208ENST00000455546 ANK2Q01484 3957 aa3.84□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A1B0GUS0 222 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A1B0GVI7 797 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MEIOCA2RUB1 952 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 A6NIN4 97 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 H3BN98 237 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 RAB27BO00194 218 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GNGT2O14610 69 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MAGEB4O15481 346 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 NDUFA7O95182 113 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ECDO95905 644 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CST1P01037 141 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 IFNGP01579 166 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 T-ENOLP0DO92 83 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MUC1P15941 1255 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF3P17036 446 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 NDUFB7P17568 137 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GLRA1P23415 457 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GRK5P34947 590 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 OPRL1P41146 370 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 NAA10P41227 235 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MAGEA2P43356 314 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GPM6AP51674 278 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF134P52741 427 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 PROK1P58294 105 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 PRDX4Q13162 271 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 LY6EQ16553 131 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 DGUOKQ16854 277 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CD300EQ496F6 205 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 LRRC10Q5BKY1 277 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CEP78Q5JTW2 689 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ATPAF1Q5TC12 328 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MOB3CQ70IA8 216 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 SHFQ7M4L6 423 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC36A1Q7Z2H8 476 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 BCDIN3DQ7Z5W3 292 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CPOQ8IVL8 374 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 BATF2Q8N1L9 274 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GALNT4Q8N4A0 578 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 TMEM86BQ8N661 226 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 C11orf44Q8N8P7 122 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ZSCAN4Q8NAM6 433 aaPredicted RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNRF1Q8ND25 227 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 BBS1Q8NFJ9 593 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 OR8B12Q8NGG6 310 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 ANGPTL6Q8NI99 470 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 TEX47Q8TBZ9 253 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GIPC3Q8TF64 312 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CANT1Q8WVQ1 401 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 RNF133Q8WVZ7 376 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 SSMEM1Q8WWF3 244 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 OR5P3Q8WZ94 311 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 DYRK2Q92630 601 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 RORBQ92753 470 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 TNFRSF14Q92956 283 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CCDC124Q96CT7 223 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 DUS3LQ96G46 650 aaKnown RBP3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 PKP2Q99959 881 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MICU1Q9BPX6 476 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 DCTN5Q9BTE1 182 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CHID1Q9BWS9 393 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 TTTY10Q9BZA0 68 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 PPA2Q9H2U2 334 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 DPAGT1Q9H3H5 408 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 MAGIXQ9H6Y5 334 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 YY1AP1Q9H869 796 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 TRIM36Q9NQ86 728 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 CMC2Q9NRP2 79 aa3.83□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC25A10Q9UBX3 287 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms