RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GTF2A1LQ9UNN4 478 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC7A11Q9UPY5 501 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC22A13Q9Y226 551 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 LOC100996750A0A140TA64 210 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1B0GTI1 187 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 hCG_1809904A0A1W2PP81 198 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1W2PPE2 198 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1W2PQL4 384 aaPredicted RBP11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1W2PR64 198 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1W2PRV1 198 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 PRR32B1ATL7 298 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 J3QT63 122 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC1A7O00341 560 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 RHBDL1O75783 438 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 MELTFP08582 738 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 NDUFB7P17568 137 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 MPZP25189 248 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 IER3P46695 156 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 HAAOP46952 286 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 GABRA2P47869 451 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 UBE2E1P51965 193 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 MFGE8Q08431 387 aaPredicted RBP11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 ACSM1Q08AH1 577 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 DGUOKQ16854 277 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 CATSPERDQ86XM0 798 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 CALHM1Q8IU99 346 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 H1FXQ92522 213 aaKnown RBP11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 PPP1R14AQ96A00 147 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 EME1Q96AY2 570 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 SEH1LQ96EE3 360 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 HRASLS5Q96KN8 279 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 KRTAP4-6Q9BYQ5 205 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 PKIBQ9C010 78 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 RIBC2Q9H4K1 309 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 IMPAD1Q9NX62 359 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 USE1Q9NZ43 259 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF222Q9UK12 451 aa11.96□□□□□ -0.49
NIF3L1-205ENST00000409588 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 PQLC2LA1A4F0 135 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 SYT7O43581 403 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 GATBO75879 557 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 NDUFA7O95182 113 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 ALPLP05186 524 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 FBP1P09467 338 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 PGA5P0DJD9 388 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 POLR2IP36954 125 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 FUT6P51993 359 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 SNRPGP62308 76 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 ACTC1P68032 377 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 ACTA1P68133 377 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 IL24Q13007 206 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 OCLNQ16625 522 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 ACP7Q6ZNF0 438 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 MRPL48Q96GC5 212 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 PLEKHA1Q9HB21 404 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 SF3B6Q9Y3B4 125 aaKnown RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 SOX21Q9Y651 276 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-205ENST00000409588 A0A1B0GW55 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 BTBD17A6NE02 478 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 ANKRD61A6NGH8 418 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 SPRY1O43609 319 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 MPZL2O60487 215 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 RPP14O95059 124 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 UBCP0CG48 685 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 PRDX2P32119 198 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 ALDH3A2P51648 485 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 GMFBP60983 142 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 PRR31Q5SQ13 230 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 TMEM244Q5VVB8 128 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 RUSC1-AS1Q66K80 236 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 GDPGP1Q6ZNW5 385 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 FAM220AQ7Z4H9 259 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 ZNRF1Q8ND25 227 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 RORBQ92753 470 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 NRIP2Q9BQI9 281 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
NIF3L1-205ENST00000409588 A0A0U1RQK1 487 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 MDFIC2A0A1B0GVS7 189 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 RFPL4AA6NLU0 287 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 RFPL4AL1F8VTS6 287 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 M0R129 80 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 NPFFO15130 113 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 NXPH2O95156 264 aa11.93□□□□□ -0.5
NIF3L1-205ENST00000409588 ISG15P05161 165 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms