RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 FAM90A13PP0C7W8 464 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 FAM90A14PP0C7W9 464 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 FAM90A24PP0C7X0 464 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 BMXP51813 675 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 GP2P55259 537 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 LOXL3P58215 753 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CSNK2BP67870 215 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 SLX4IPQ5VYV7 408 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 NXNL2Q5VZ03 156 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 TMEM200BQ69YZ2 307 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CREB3L1Q96BA8 519 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 RCC1LQ96I51 464 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 PBOV1Q9GZY1 135 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 SESN1Q9Y6P5 492 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 IGHV3OR16-10A0A075B7F0 116 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 A0A1B0GW55 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 A6NLC8 198 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 ZNF850A8MQ14 1090 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 M0QZK8 103 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CHST1O43916 411 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L2P0CJ85 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L3P0CJ86 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L4P0CJ87 422 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L5P0CJ88 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L6P0CJ89 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L7P0CJ90 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 GLRA1P23415 457 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CD83Q01151 205 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 HNRNPA0Q13151 305 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 HABP2Q14520 560 aaPredicted RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CNN3Q15417 329 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 AADACL4Q5VUY2 407 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4L9Q6RFH8 374 aaPredicted RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 GID4Q8IVV7 300 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 OR6N2Q8NGY6 317 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 HAVCR2Q8TDQ0 301 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 RNF170Q96K19 258 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 HIST1H2AAQ96QV6 131 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 SSX3Q99909 188 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 NIPSNAP1Q9BPW8 284 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 IFT22Q9H7X7 185 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 CLN6Q9NWW5 311 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 DUX4Q9UBX2 424 aa5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 WARS2Q9UGM6 360 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 SAMHD1Q9Y3Z3 626 aaKnown RBP5.03□□□□□ -1.6
SMARCAD1-203ENST00000394961 PRKDCP78527 4128 aaKnown RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 IGHV3OR15-7A0A075B7D8 119 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 LY6LH3BQJ8 138 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 H3BUI4 141 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 F2RL2O00254 374 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 TBX1O43435 398 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 TTRP02766 147 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 SLC35F1Q5T1Q4 408 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 OR52W1Q6IF63 320 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 ERI1Q8IV48 349 aaKnown RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 COMMD1Q8N668 190 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 PPP1R35Q8TAP8 253 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 RPS4Y2Q8TD47 263 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 RPL3LQ92901 407 aaKnown RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 NSL1Q96IY1 281 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 DUX5Q96PT3 197 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 PRSS22Q9GZN4 317 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 DNAJB11Q9UBS4 358 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 KLHDC2Q9Y2U9 406 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 hCG_1807616A0A1W2PRN6 198 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 H3BUX3 64 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 SLC1A7O00341 560 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 FBXO24O75426 580 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 ZNF205O95201 554 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 OMGP23515 440 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 PRDX2P32119 198 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 BDH1Q02338 343 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 TMEM30BQ3MIR4 351 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 Q6ZPA2 131 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 TCF23Q7RTU1 214 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 CATSPERDQ86XM0 798 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 MKXQ8IYA7 352 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 DEFB107AQ8IZN7 70 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 KLHDC1Q8N7A1 406 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 PP6455Q8WZ26 134 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 MBOAT4Q96T53 435 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 MYCBPQ99417 103 aaPredicted RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 RERGLQ9H628 205 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 C19orf12Q9NSK7 152 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 ZNF732B4DXR9 585 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 NRASP01111 189 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 CLUP10909 449 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 PRKXP51817 358 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 RIDAP52758 137 aaKnown RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 MRPL28Q13084 256 aaKnown RBP5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 KLHL22Q53GT1 634 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 LYPD4Q6UWN0 246 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 CPLX4Q7Z7G2 160 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 OR8H2Q8N162 312 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 FEVQ99581 238 aa5.02□□□□□ -1.61
SMARCAD1-203ENST00000394961 TEAD3Q99594 435 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms