RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DTX3Q8N9I9 347 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 OR52H1Q8NGJ2 320 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 OR1J2Q8NGS2 313 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 OR14K1Q8NGZ2 314 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 NKIRAS2Q9NYR9 191 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
CXCL12-201ENST00000343575 ANKRD20A5PA0PJZ0 165 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 IGFBP3P17936 291 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 CCNOP22674 350 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 PRSS12P56730 875 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 FLI1Q01543 452 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 HLXQ14774 488 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 CDSNQ15517 529 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 Q6ZTK2 550 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 OR13C3Q8NGS6 347 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 FAM71F1Q96KD3 344 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 ABCD4O14678 606 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 ARPC1BO15143 372 aaKnown RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 NDUFB6O95139 128 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 CALCBP10092 127 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF92Q03936 586 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 IGFBP7Q16270 282 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 TIMM23BQ5SRD1 257 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 TMUB2Q71RG4 321 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 FJX1Q86VR8 437 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 STPG2Q8N412 459 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 FGGYQ96C11 551 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 S100A16Q96FQ6 103 aaKnown RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 OR10A2Q9H208 303 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 OR10A4Q9H209 315 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 SLC25A32Q9H2D1 315 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 OBP2BQ9NPH6 170 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
CXCL12-201ENST00000343575 V9GYS6 101 aa12.68□□□□□ -0.38
CXCL12-201ENST00000343575 MPTX1A8MV57 137 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 ACKR3P25106 362 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 APLNRP35414 380 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 UQCRFS1P47985 274 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 SCAND1P57086 179 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
CXCL12-201ENST00000343575 SFRP4Q6FHJ7 346 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF529Q6P280 563 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 DOK3Q7L591 496 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 OR51A2Q8NGJ7 313 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 LGALS14Q8TCE9 139 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 PCNPQ8WW12 178 aaKnown RBP12.67□□□□□ -0.38
CXCL12-201ENST00000343575 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 POFUT1Q9H488 388 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF69Q9UC07 566 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 STARD10Q9Y365 291 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 ETV7Q9Y603 341 aa12.67□□□□□ -0.38
CXCL12-201ENST00000343575 CADP27708 2225 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 GMDSO60547 372 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 FSTP19883 344 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 HOXC12P31275 282 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 ELOVL5Q9NYP7 299 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 TAS2R8Q9NYW2 309 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 PRELID3BQ9Y3B1 194 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 ADGRG4Q8IZF6 3080 aa12.66□□□□□ -0.38
CXCL12-201ENST00000343575 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 DHRS3O75911 302 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 MAS1P04201 325 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 PRB1P04280 392 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CECR9P0C854 216 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CD37P11049 281 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 ZNF35P13682 527 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 RAD52P43351 418 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FAM3AP98173 230 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 TLE1Q04724 770 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 GSG1LQ6UXU4 331 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CDH26Q8IXH8 852 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 LINC00518Q8N0U6 118 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FAM169BQ8N8A8 192 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 DNAAF1Q8NEP3 725 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 OR52I2Q8NH67 350 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FBXW5Q969U6 566 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 FBXO9Q9UK97 447 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-201ENST00000343575 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-201ENST00000343575 LOC390937A0A1W2PQ73 354 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 IFITM5A6NNB3 132 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CD2P06729 351 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 LPLP06858 475 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 LYPD6Q86Y78 171 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 COQ8AQ8NI60 647 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 THRSPQ92748 146 aa12.65□□□□□ -0.38
CXCL12-201ENST00000343575 APOBEC3DQ96AK3 386 aaPredicted RBP12.65□□□□□ -0.38
CXCL12-201ENST00000343575 CXorf58Q96LI9 332 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms