RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SCGB1D2O95969 90 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 NAT2P11245 290 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 OTX1P32242 354 aaPredicted RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 TSPAN7P41732 249 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 RBP2P50120 134 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 PLGLB1Q02325 96 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 FBXL14Q8N1E6 418 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 OCSTAMPQ9BR26 566 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SF3B5Q9BWJ5 86 aaKnown RBP10.06□□□□□ -0.8
PTPN2-201ENST00000309660 SLC6A15Q9H2J7 730 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 ASF1BQ9NVP2 202 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 TIMM10BQ9Y5J6 103 aa10.06□□□□□ -0.8
PTPN2-201ENST00000309660 IGKV1-27A0A075B6S5 117 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SFT2D2O95562 160 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 HPP00738 406 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 HLA-HP01893 362 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 CBX5P45973 191 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 DEFA5Q01523 94 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 PABPC1L2AQ5JQF8 200 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 AADACL3Q5VUY0 350 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 DHRS13Q6UX07 377 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 PEG10Q86TG7 708 aaKnown RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 TMEM185AQ8NFB2 350 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 GHRLQ9UBU3 117 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 BOKQ9UMX3 212 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SERPINE3A8MV23 424 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 C9orf172C9J069 976 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 HSPB6O14558 160 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FPR2P25090 351 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 MAGEA5P43359 124 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SP6Q3SY56 376 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 TMEM164Q5U3C3 297 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 VASH2Q86V25 355 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SULF2Q8IWU5 870 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FNDC9Q8TBE3 224 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 OR10C1Q96KK4 312 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SCGB3A2Q96PL1 93 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 GPR35Q9HC97 309 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 TUBAL3A6NHL2 446 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 OR7C1O76099 320 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 CD79AP11912 226 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 CRYGSP22914 178 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 RBMXP38159 391 aaKnown RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FOXG1P55316 489 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SNTB1Q13884 538 aaKnown RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 CNN3Q15417 329 aaKnown RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FAHD2BQ6P2I3 314 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FAM89BQ8N5H3 189 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SPERTQ8NA61 448 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 ZSCAN4Q8NAM6 433 aaPredicted RBP10.05□□□□□ -0.8
PTPN2-201ENST00000309660 CPT1CQ8TCG5 803 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 SSC4DQ8WTU2 575 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 ASB13Q8WXK3 278 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 PSMF1Q92530 271 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 FAHD2AQ96GK7 314 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 TAAR9Q96RI9 348 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 OR2H1Q9GZK4 316 aa10.05□□□□□ -0.8
PTPN2-201ENST00000309660 NCKAP5O14513 1909 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 B8ZZF3 427 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 CST2P09228 141 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ACP1P24666 158 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 RAB32Q13637 225 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 TMED6Q8WW62 240 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ARPC5LQ9BPX5 153 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 NUDT16L1Q9BRJ7 211 aaKnown RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 WNT5BQ9H1J7 359 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 SLC7A10Q9NS82 523 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 OR5AC2Q9NZP5 309 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 AK3Q9UIJ7 227 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 SLC7A11Q9UPY5 501 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 SVILO95425 2214 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 OR5H8P0DN80 308 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 HIST1H3AP68431 136 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 PHLDA2Q53GA4 152 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 HIST2H3PS2Q5TEC6 136 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 PEAR1Q5VY43 1037 aaPredicted RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF585AQ6P3V2 769 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 HIST2H3AQ71DI3 136 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 TUSC5Q8IXB3 177 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 OR5T2Q8NGG2 359 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 EMG1Q92979 244 aaKnown RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 CPNE4Q96A23 557 aaPredicted RBP10.04□□□□□ -0.8
PTPN2-201ENST00000309660 WBP1Q96G27 269 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF442Q9H7R0 627 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 ST3GAL6Q9Y274 331 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 R4GN57 208 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
PTPN2-201ENST00000309660 A0A1B0GW55 424 aa10.03□□□□□ -0.8
PTPN2-201ENST00000309660 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
PTPN2-201ENST00000309660 H0YIZ8 118 aa10.03□□□□□ -0.8
PTPN2-201ENST00000309660 GP1BAP07359 652 aa10.03□□□□□ -0.8
PTPN2-201ENST00000309660 DUX4L2P0CJ85 424 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms