RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 EVX1P49640 407 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 H2BFSP57053 126 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RAC3P60763 192 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CYCSP99999 105 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 MLLT11Q13015 90 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SPHARQ15513 63 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 DCAF12Q5T6F0 453 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 C22orf42Q6IC83 251 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 LHFPL1Q86WI0 220 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GVQW1Q8N7I0 195 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 BORCS8Q96FH0 119 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 S100A16Q96FQ6 103 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 LPAR5Q9H1C0 372 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CA10Q9NS85 328 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 IGLV3-9A0A075B6K5 115 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 KANTRA0A1W2PQU2 76 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF99A8MXY4 864 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 EIF1BO60739 113 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GLCEO94923 617 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 IL6RP08887 468 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PGAM2P15259 253 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SRD5A2P31213 254 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 POLR2HP52434 150 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SRPXP78539 464 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PSG7Q13046 419 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 C1orf100Q5SVJ3 147 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GLYATL3Q5SZD4 288 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM131AQ6UXB0 335 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF676Q8N7Q3 588 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TEX19Q8NA77 164 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 INO80EQ8NBZ0 244 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ABHD4Q8TB40 342 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PHYHIPQ92561 330 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 BORCS7Q96B45 105 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SGTBQ96EQ0 304 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ADAD1Q96M93 576 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CCDC32Q9BV29 185 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CNTD2Q9H8S5 307 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR35Q9HC97 309 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM38BQ9NVV0 291 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 HPF1Q9NWY4 346 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 A8MXE2 369 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TOR1AO14656 332 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 IDH3BO43837 385 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RP2O75695 350 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RAC2P15153 192 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 DIAPH2-AS1Q14236 149 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 BTN2A1Q7KYR7 527 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 IL22RA1Q8N6P7 574 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF454Q8N9F8 522 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF610Q8N9Z0 462 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC25A43Q8WUT9 341 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ITLN2Q8WWU7 325 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 DPAGT1Q9H3H5 408 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CYSLTR2Q9NS75 346 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 EMC9Q9Y3B6 208 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CD8B2A6NJW9 211 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR171O14626 319 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 RNF13O43567 381 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 CD8BP10966 210 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 SFTPDP35247 375 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 MEOX1P50221 254 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 TSPAN5P62079 268 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 RHEBQ15382 184 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 BRICD5Q6PL45 260 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 UEVLDQ8IX04 471 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 DYNAPQ8N1N2 210 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 OR51D1Q8NGF3 324 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 OR52N1Q8NH53 320 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 FANK1Q8TC84 345 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 MED28Q9H204 178 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 RERGLQ9H628 205 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 PLEKHF2Q9H8W4 249 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 NKX6-3A6NJ46 265 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 HLA-HP01893 362 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 UCNP55089 124 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 RAB40BQ12829 278 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 OR7A5Q15622 319 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM176BQ3YBM2 270 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM209AQ5JX71 171 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 OR11H7Q8NGC8 314 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 MCFD2Q8NI22 146 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 ST8SIA1Q92185 356 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM46BQ96A09 425 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 BSCL2Q96G97 398 aaPredicted RBP4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 UTP23Q9BRU9 249 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF69Q9UC07 566 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 LAMP5Q9UJQ1 280 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 STARD10Q9Y365 291 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 KLRC4-KLRK1H3BQV0 150 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 ZFAND5O76080 213 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 RAF1P04049 648 aa4.72□□□□□ -1.65
TOPBP1-201ENST00000260810 DSCR4P56555 118 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 222.5 ms