RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 C21orf140B9A014 251 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 M0R2Z0 102 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 MPGP29372 298 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 BEX5Q5H9J7 111 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 MRPL2Q5T653 305 aaKnown RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 TFAP2BQ92481 460 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 THAP7Q9BT49 309 aaPredicted RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 C7orf72A4D263 438 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 FCGR3BO75015 233 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 STXBP6Q8NFX7 210 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 LHX4Q969G2 390 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 COL16A1Q07092 1604 aaPredicted RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 NHSL1Q5SYE7 1610 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 H7C1H1 209 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 KCNAB3O43448 404 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CR2P20023 1033 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 ZNF787Q6DD87 383 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CYHR1Q6ZMK1 362 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 MBOAT2Q6ZWT7 520 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 OLIG3Q7RTU3 272 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 KIR3DX1Q9H7L2 352 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CSNK1G3Q9Y6M4 447 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 RELQ04864 619 aaPredicted RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 FAM131CQ96AQ9 280 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 FOXB1Q99853 325 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 DNAJB12Q9NXW2 375 aaKnown RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 SNX11Q9Y5W9 270 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 LOC100289279A0A1B0GTE1 492 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 GPX1P07203 203 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 SKP2Q13309 424 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 ERASQ7Z444 233 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 OR4C16Q8NGL9 310 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 MRPL13Q9BYD1 178 aaKnown RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 RAB33BQ9H082 229 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 SH2D2AQ9NP31 389 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 A0A1B0GU03 582 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CLEC18AA5D8T8 446 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 A8MWL6 223 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 ATP1B1P05026 303 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CD300CQ08708 224 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 RGNQ15493 299 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 CLEC18CQ8NCF0 446 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 ALX4Q9H161 411 aaPredicted RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 MBNL1Q9NR56 388 aaKnown RBP3.1□□□□□ -1.91
NEB-201ENST00000172853 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
NEB-201ENST00000172853 ASAH2BP0C7U1 165 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DAOP14920 347 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GABRA5P31644 462 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PRLHRP49683 370 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LRRC26Q2I0M4 334 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PGGHGQ32M88 737 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ZBTB37Q5TC79 503 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 APOOLQ6UXV4 268 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ADAMTSL4Q6UY14 1074 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TMEM64Q6YI46 380 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 C16orf82Q7Z2V1 217 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SCML4Q8N228 414 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GALNT14Q96FL9 552 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OR2B2Q9GZK3 357 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 MRC1P22897 1456 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TUBGCP6Q96RT7 1819 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 BCL9O00512 1426 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 METTL12A8MUP2 240 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 GYPAP02724 150 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PRDX2P32119 198 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ZNF547Q8IVP9 402 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SLAMF6Q96DU3 332 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SEC11CQ9BY50 192 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SIPA1L3O60292 1781 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 TMEM189-UBE2V1I3L0A0 370 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 NDUFA2O43678 99 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SSSCA1O60232 199 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 NKX2-2O95096 273 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ATF1P18846 271 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ACKR1Q16570 336 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 BMPERQ8N8U9 685 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 MRGPRX1Q96LB2 322 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DDX60LQ5H9U9 1706 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 LIMS3P0CW19 117 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 LIMS4P0CW20 117 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 CGB3P0DN86 165 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 CGB7P0DN87 165 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 SOX8P57073 446 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 BCL7AQ4VC05 210 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 RPS26P11Q5JNZ5 115 aaPredicted RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 RASD2Q96D21 266 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 DNAJC19Q96DA6 116 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TRAV30A0A087WSZ9 112 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TGFB1I1O43294 461 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PMS2P2O95744 297 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ZNF735P0CB33 412 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 THBS4P35443 961 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 OR13A1Q8NGR1 328 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 FLYWCH2Q96CP2 140 aaKnown RBP3.09□□□□□ -1.91
NEB-201ENST00000172853 CMBLQ96DG6 245 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 PIPOXQ9P0Z9 390 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 C5AR2Q9P296 337 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 ALS2Q96Q42 1657 aa3.09□□□□□ -1.91
NEB-201ENST00000172853 TCRBV4S1A1TA0A5B7 111 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms