RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SORCS2Q96PQ0 1159 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 BCL7BQ9BQE9 202 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 EGLN1Q9GZT9 426 aa16.8■□□□□ 0.28
PDLIM2-221ENST00000622702 FAM230AA0A1W2PPH8 454 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 MAGEB3O15480 346 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 NCR1O76036 304 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 MAS1P04201 325 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 ADRA2CP18825 462 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 MTNR1BP49286 362 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 TMBIM6P55061 237 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 ZNF154Q13106 437 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 SPRNQ5BIV9 151 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 SPNS3Q6ZMD2 512 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 CDH26Q8IXH8 852 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 OR52N4Q8NGI2 321 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 RAB2BQ8WUD1 216 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 TLNRD1Q9H1K6 362 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 OR51I2Q9H344 312 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 RNF167Q9H6Y7 350 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 SAP30LQ9HAJ7 183 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 DECR2Q9NUI1 292 aa16.79■□□□□ 0.28
PDLIM2-221ENST00000622702 IGKV1-27A0A075B6S5 117 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 LRP5LA4QPB2 252 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 NDUFS7O75251 213 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 HCKP08631 526 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 CD37P11049 281 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 TNFRSF1AP19438 455 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 ATP1B3P54709 279 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 MTCP1P56278 107 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 LSM3P62310 102 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 Q5PR19 223 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 DDI2Q5TDH0 399 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 CRIP3Q6Q6R5 217 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 ZNF573Q86YE8 665 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 KRTAP1-3Q8IUG1 177 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 ERGIC1Q969X5 290 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 CPNE2Q96FN4 548 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 RBM38Q9H0Z9 239 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 CEPT1Q9Y6K0 416 aa16.78■□□□□ 0.28
PDLIM2-221ENST00000622702 TRIM64BA6NI03 449 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 TPD52L2O43399 206 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 NCS1P62166 190 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 KISS1Q15726 138 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 SHEQ5VZ18 495 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 TPRA1Q86W33 373 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 LYPD6Q86Y78 171 aa16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 ZNF420Q8TAQ5 688 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-221ENST00000622702 SMIM31A0A1B0GVY4 71 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 PDCD5O14737 125 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 HPXP02790 462 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 GRPP07492 148 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 VBP1P61758 197 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 MPPED2Q15777 294 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 PRAMEF6Q5VXH4 476 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 WFDC11Q8NEX6 87 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 SPACA5Q96QH8 159 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 METTL17Q9H7H0 456 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 GCM1Q9NP62 436 aa16.76■□□□□ 0.27
PDLIM2-221ENST00000622702 IGHV3-64DA0A0J9YX35 117 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 IGHV4-39P01824 125 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 MPZP25189 248 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 SDC2P34741 201 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 ZNF93P35789 620 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 TGFBR1P36897 503 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 HAAOP46952 286 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 PSMD7P51665 324 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 EFNA4P52798 201 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 MRPS11P82912 194 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 CHD3Q12873 2000 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 GLT8D1Q68CQ7 371 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 RNF144BQ7Z419 303 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 CALHM1Q8IU99 346 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 C11orf53Q8IXP5 236 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 SCCPDHQ8NBX0 429 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 Q8TCH9 128 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 ISOC1Q96CN7 298 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 FOXRED1Q96CU9 486 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 GFI1Q99684 422 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 PKIBQ9C010 78 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 FN3KRPQ9HA64 309 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 NDUFA13Q9P0J0 144 aa16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 AK6Q9Y3D8 172 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-221ENST00000622702 DPPA5A6NC42 116 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 J3QT63 122 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 NOL3O60936 208 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 F12P00748 615 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 RAB3BP20337 219 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 ZP1P60852 638 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 HAGHLQ6PII5 290 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 PRSS57Q6UWY2 283 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 ANGPTL5Q86XS5 388 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 AQP3Q92482 292 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 UQCC2Q9BRT2 126 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 PPP1R3CQ9UQK1 317 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 ZNF469Q96JG9 3925 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 HIVEP1P15822 2718 aa16.74■□□□□ 0.27
PDLIM2-221ENST00000622702 A6NLC8 198 aa16.73■□□□□ 0.27
PDLIM2-221ENST00000622702 IFNL4K9M1U5 179 aa16.73■□□□□ 0.27
PDLIM2-221ENST00000622702 ZNF701M0R085 212 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-221ENST00000622702 CDIPTO14735 213 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms