RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LSM3P62310 102 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 SLC35A1P78382 337 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OC90Q02509 493 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 PAX8Q06710 450 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PUDPQ08623 228 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ACSM1Q08AH1 577 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ZNF415Q09FC8 603 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ZP4Q12836 540 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GPR50Q13585 617 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GGTLC2Q14390 218 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OR7A5Q15622 319 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PLPPR5Q32ZL2 321 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 MOGAT2Q3SYC2 334 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GLYR1Q49A26 553 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 ELFN2Q5R3F8 820 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PRAMEF20Q5VT98 475 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 RAET1LQ5VY80 246 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PAMR1Q6UXH9 720 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PLEKHG7Q6ZR37 379 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 LINC00299Q6ZSB3 139 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 EGFL6Q8IUX8 553 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CROCCP3Q8IVE0 287 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SLC35F2Q8IXU6 374 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SYS1Q8N2H4 156 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ATP6V1C2Q8NEY4 427 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 BBS1Q8NFJ9 593 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OR2M3Q8NG83 312 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OR6K6Q8NGW6 343 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OR2T27Q8NH04 317 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PAQR8Q8TEZ7 354 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 RNF138Q8WVD3 245 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 KCNE4Q8WWG9 221 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ASB17Q8WXJ9 295 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 AP3S1Q92572 193 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 THRSPQ92748 146 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 BORCS5Q969J3 196 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PNPLA2Q96AD5 504 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 RASD2Q96D21 266 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 NXPE2Q96DL1 559 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ZNF486Q96H40 463 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 CEP19Q96LK0 163 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 KCTD7Q96MP8 289 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OPALINQ96PE5 141 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 TEAD3Q99594 435 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CHCHD6Q9BRQ6 235 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 UTP23Q9BRU9 249 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 NAA50Q9GZZ1 169 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 DCSTAMPQ9H295 470 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 TXNIPQ9H3M7 391 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 MED20Q9H944 212 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SIAEQ9HAT2 523 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 PLGRKTQ9HBL7 147 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CHST11Q9NPF2 352 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 RPRD1BQ9NQG5 326 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 KLF13Q9Y2Y9 288 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 HDGFL3Q9Y3E1 203 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CHCHD2Q9Y6H1 151 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SEC16AO15027 2179 aa4□□□□□ -1.77
VPS29-212ENST00000621131 FER1L5A0AVI2 2057 aa4□□□□□ -1.77
VPS29-212ENST00000621131 PNMA8CA0A1B0GUJ8 204 aa4□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PNV4 684 aa4□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PR80 420 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CCDC182A6NF36 153 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF726A6NNF4 738 aa4□□□□□ -1.77
VPS29-212ENST00000621131 NPIPA2E9PIF3 369 aa4□□□□□ -1.77
VPS29-212ENST00000621131 NPIPA3F8WFD2 350 aa4□□□□□ -1.77
VPS29-212ENST00000621131 J3QLW9 94 aa4□□□□□ -1.77
VPS29-212ENST00000621131 SULT2B1O00204 365 aa4□□□□□ -1.77
VPS29-212ENST00000621131 PLPP3O14495 311 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CTDSP2O14595 271 aa4□□□□□ -1.77
VPS29-212ENST00000621131 EIF1BO60739 113 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 KRT8P05787 483 aa4□□□□□ -1.77
VPS29-212ENST00000621131 MRPL3P09001 348 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 SBK2P0C263 348 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF823P16415 610 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF19P17023 458 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF43P17038 809 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CNR1P21554 472 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GALP22466 123 aa4□□□□□ -1.77
VPS29-212ENST00000621131 SLC2A5P22732 501 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CFL1P23528 166 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 GDF1P27539 372 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CALRP27797 417 aaKnown RBP4□□□□□ -1.77
VPS29-212ENST00000621131 SRD5A2P31213 254 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TGFBR2P37173 567 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GUCA1AP43080 201 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 TMEM50BP56557 158 aa4□□□□□ -1.77
VPS29-212ENST00000621131 FXYD6P3P58550 94 aa4□□□□□ -1.77
VPS29-212ENST00000621131 PLGLB1Q02325 96 aa4□□□□□ -1.77
VPS29-212ENST00000621131 GLO1Q04760 184 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TPBGQ13641 420 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF846Q147U1 533 aa4□□□□□ -1.77
VPS29-212ENST00000621131 SPCS2Q15005 226 aa4□□□□□ -1.77
VPS29-212ENST00000621131 TOMM34Q15785 309 aaPredicted RBP4□□□□□ -1.77
VPS29-212ENST00000621131 MOGQ16653 247 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ODF4Q2M2E3 257 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ZNF404Q494X3 552 aa4□□□□□ -1.77
VPS29-212ENST00000621131 CCDC58Q4VC31 144 aa4□□□□□ -1.77
VPS29-212ENST00000621131 ACER2Q5QJU3 275 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms