RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 CHODLQ9H9P2 273 aa10.4□□□□□ -0.74
TGFB1-204ENST00000600196 GCM1Q9NP62 436 aa10.4□□□□□ -0.74
TGFB1-204ENST00000600196 GPR173Q9NS66 373 aa10.4□□□□□ -0.74
TGFB1-204ENST00000600196 TAS2R4Q9NYW5 299 aa10.4□□□□□ -0.74
TGFB1-204ENST00000600196 PPP1R3CQ9UQK1 317 aa10.4□□□□□ -0.74
TGFB1-204ENST00000600196 CENPEQ02224 2701 aa10.4□□□□□ -0.75
TGFB1-204ENST00000600196 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 H0YL77 283 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 TPD52L2O43399 206 aaKnown RBP10.39□□□□□ -0.75
TGFB1-204ENST00000600196 NDUFA2O43678 99 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 LMX1BO60663 402 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 LHBP01229 141 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 IL1AP01583 271 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 IRF2P14316 349 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 DAOP14920 347 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 GADD45AP24522 165 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 THBS2P35442 1172 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 ZNF93P35789 620 aaPredicted RBP10.39□□□□□ -0.75
TGFB1-204ENST00000600196 MAGEB1P43366 347 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 GPM6AP51674 278 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 ATP5J2P56134 94 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 KRTAP10-9P60411 292 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 CCL8P80075 99 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 PDZK1IP1Q13113 114 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 FAM189A2Q15884 450 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 C1orf100Q5SVJ3 147 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 ASPHD2Q6ICH7 369 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 PEG10Q86TG7 708 aaKnown RBP10.39□□□□□ -0.75
TGFB1-204ENST00000600196 LRRTM1Q86UE6 522 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 OR10AD1Q8NGE0 317 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 OR13C5Q8NGS8 318 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 OR13C9Q8NGT0 318 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 ITLN1Q8WWA0 313 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 AQP3Q92482 292 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 MRPS24Q96EL2 167 aaKnown RBP10.39□□□□□ -0.75
TGFB1-204ENST00000600196 IL36GQ9NZH8 169 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 NPTNQ9Y639 398 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 BAHCC1Q9P281 2608 aa10.39□□□□□ -0.75
TGFB1-204ENST00000600196 HECTD1Q9ULT8 2610 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 NAV2Q8IVL1 2488 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 SLC22A1O15245 554 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 HCKP08631 526 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 MUC1P15941 1255 aaPredicted RBP10.38□□□□□ -0.75
TGFB1-204ENST00000600196 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
TGFB1-204ENST00000600196 PDLIM4P50479 330 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 DYNC1I2Q13409 638 aaKnown RBP10.38□□□□□ -0.75
TGFB1-204ENST00000600196 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 CEP78Q5JTW2 689 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 ELP2Q6IA86 826 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 DNM1P46Q6ZS02 220 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 CDH24Q86UP0 819 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 RAB1CQ92928 201 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 CHCHD6Q9BRQ6 235 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 DNTTIP1Q9H147 329 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 OR51E2Q9H255 320 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 LIME1Q9H400 295 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 EXOSC4Q9NPD3 245 aaKnown RBP10.38□□□□□ -0.75
TGFB1-204ENST00000600196 BATF3Q9NR55 127 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 FBLN5Q9UBX5 448 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 V9GY05 133 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 HRNRQ86YZ3 2850 aaPredicted RBP10.38□□□□□ -0.75
TGFB1-204ENST00000600196 APCP25054 2843 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 AKAP6Q13023 2319 aa10.38□□□□□ -0.75
TGFB1-204ENST00000600196 TRAV8-7A0A075B6U6 113 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 FAM230AA0A1W2PPH8 454 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 TMEM178BH3BS89 294 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
TGFB1-204ENST00000600196 RP2O75695 350 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 BPNT1O95861 308 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 IGHV4-39P01824 125 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 HPXP02790 462 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 GRPP07492 148 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 RAB3BP20337 219 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 CDKN1AP38936 164 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 PTGFRP43088 359 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 HAAOP46952 286 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 PRSS12P56730 875 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 ZP1P60852 638 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 ERVK11-1P61568 191 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 CTF1Q16619 201 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 DDI2Q5TDH0 399 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 HIST2H2BCQ6DN03 193 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 C22orf42Q6IC83 251 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 HAGHLQ6PII5 290 aaPredicted RBP10.37□□□□□ -0.75
TGFB1-204ENST00000600196 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 ZCCHC24Q8N2G6 241 aaKnown RBP10.37□□□□□ -0.75
TGFB1-204ENST00000600196 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 OR6M1Q8NGM8 313 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 TBC1D15Q8TC07 691 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 GTF3AQ92664 365 aaKnown RBP10.37□□□□□ -0.75
TGFB1-204ENST00000600196 TMIGD2Q96BF3 282 aa10.37□□□□□ -0.75
TGFB1-204ENST00000600196 PPIL3Q9H2H8 161 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms