RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FAM90A7PA6NKC0 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FOXI3A8MTJ6 420 aaPredicted RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A22PA8MWA6 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A12PA8MX19 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A5PA8MXJ8 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A23PA8MXZ1 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FABP7O15540 132 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 RGS11O94810 467 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 IGHV3-9P01782 118 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 HPXP02790 462 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FCER2P06734 321 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 CRHP06850 196 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A15PP0C7V4 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A13PP0C7W8 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A14PP0C7W9 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM90A24PP0C7X0 464 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 PTGER4P35408 488 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 RAD52P43351 418 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 TAS2R31P59538 309 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 TAS2R46P59540 309 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 UBE2MP61081 183 aaKnown RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 RAP2BP61225 183 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 CXADRP78310 365 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ZNF92Q03936 586 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 HGFACQ04756 655 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ARFRP1Q13795 201 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 C1QTNF12Q5T7M4 302 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 NSUN5P2Q63ZY6 315 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 LPCAT3Q6P1A2 487 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 CRIP3Q6Q6R5 217 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 SEZ6L2Q6UXD5 910 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 UNQ6126/PRO20091Q6UXV3 157 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 MOB3CQ70IA8 216 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 FAM214BQ7L5A3 538 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 MRPL21Q7Z2W9 205 aaKnown RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 HOGA1Q86XE5 327 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 C1orf174Q8IYL3 243 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ASCC1Q8N9N2 400 aaKnown RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 TMEM104Q8NE00 496 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 C1orf162Q8NEQ5 155 aaPredicted RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 OR6K3Q8NGY3 331 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 OR4K15Q8NH41 348 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 OR2AE1Q8NHA4 323 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 GRPEL2Q8TAA5 225 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ZNF431Q8TF32 576 aaPredicted RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 PHF3Q92576 2039 aaKnown RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 SPACA5Q96QH8 159 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 BEX2Q9BXY8 128 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 CHST6Q9GZX3 395 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 BANF2Q9H503 90 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ELL3Q9HB65 397 aaPredicted RBP9.01□□□□□ -0.97
VPS25-203ENST00000589520 RHOFQ9HBH0 211 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 ZNF69Q9UC07 566 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 NCKAP5O14513 1909 aa9.01□□□□□ -0.97
VPS25-203ENST00000589520 LOC100509620A0A075B734 347 aa9□□□□□ -0.97
VPS25-203ENST00000589520 A0A0A6YYD4 124 aa9□□□□□ -0.97
VPS25-203ENST00000589520 C5orf49A4QMS7 147 aa9□□□□□ -0.97
VPS25-203ENST00000589520 WIPF3A6NGB9 483 aa9□□□□□ -0.97
VPS25-203ENST00000589520 SOCS1O15524 211 aa9□□□□□ -0.97
VPS25-203ENST00000589520 OR2A4O95047 310 aa9□□□□□ -0.97
VPS25-203ENST00000589520 HLA-HP01893 362 aa9□□□□□ -0.97
VPS25-203ENST00000589520 CRYABP02511 175 aaKnown RBP9□□□□□ -0.97
VPS25-203ENST00000589520 EDN3P14138 238 aa9□□□□□ -0.97
VPS25-203ENST00000589520 WT1P19544 449 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 ANXA7P20073 488 aaKnown RBP9□□□□□ -0.97
VPS25-203ENST00000589520 SERPINA2P20848 420 aa9□□□□□ -0.97
VPS25-203ENST00000589520 SDHBP21912 280 aa9□□□□□ -0.97
VPS25-203ENST00000589520 ANOS1P23352 680 aa9□□□□□ -0.97
VPS25-203ENST00000589520 BLVRBP30043 206 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 NKX2-5P52952 324 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 UBE2NP61088 152 aaKnown RBP9□□□□□ -0.97
VPS25-203ENST00000589520 PDZK1IP1Q13113 114 aa9□□□□□ -0.97
VPS25-203ENST00000589520 GUSBP1Q15486 140 aa9□□□□□ -0.97
VPS25-203ENST00000589520 GRK1Q15835 563 aa9□□□□□ -0.97
VPS25-203ENST00000589520 TBC1D28Q2M2D7 210 aa9□□□□□ -0.97
VPS25-203ENST00000589520 CEACAM21Q3KPI0 293 aa9□□□□□ -0.97
VPS25-203ENST00000589520 PLAC9Q5JTB6 97 aa9□□□□□ -0.97
VPS25-203ENST00000589520 INO80CQ6PI98 192 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 Q6ZT83 130 aa9□□□□□ -0.97
VPS25-203ENST00000589520 TMEM200AQ86VY9 491 aa9□□□□□ -0.97
VPS25-203ENST00000589520 Q8NFD4 153 aa9□□□□□ -0.97
VPS25-203ENST00000589520 BEST4Q8NFU0 473 aa9□□□□□ -0.97
VPS25-203ENST00000589520 OR4D10Q8NGI6 311 aa9□□□□□ -0.97
VPS25-203ENST00000589520 OR5A2Q8NGI9 324 aa9□□□□□ -0.97
VPS25-203ENST00000589520 ST8SIA4Q92187 359 aa9□□□□□ -0.97
VPS25-203ENST00000589520 PIGCQ92535 297 aa9□□□□□ -0.97
VPS25-203ENST00000589520 DVL3Q92997 716 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 ARHGAP5-AS1Q96IT6 56 aa9□□□□□ -0.97
VPS25-203ENST00000589520 Q96M66 194 aa9□□□□□ -0.97
VPS25-203ENST00000589520 FAM210AQ96ND0 272 aa9□□□□□ -0.97
VPS25-203ENST00000589520 OR2A7Q96R45 310 aa9□□□□□ -0.97
VPS25-203ENST00000589520 NKX3-1Q99801 234 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 NICN1Q9BSH3 213 aa9□□□□□ -0.97
VPS25-203ENST00000589520 PECRQ9BY49 303 aa9□□□□□ -0.97
VPS25-203ENST00000589520 TINAGL1Q9GZM7 467 aaPredicted RBP9□□□□□ -0.97
VPS25-203ENST00000589520 ZMAT3Q9HA38 289 aaKnown RBP9□□□□□ -0.97
VPS25-203ENST00000589520 OBP2BQ9NPH6 170 aa9□□□□□ -0.97
VPS25-203ENST00000589520 DLL4Q9NR61 685 aa9□□□□□ -0.97
VPS25-203ENST00000589520 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms