RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 OR5AL1P0C617 328 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 CD28P10747 220 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 PRSS3P35030 304 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 NUP62P37198 522 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-210ENST00000553455 ERFP50548 548 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 PPP1CAP62136 330 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 DYNC1I2Q13409 638 aaKnown RBP2.81□□□□□ -1.96
SYNE2-210ENST00000553455 SHHQ15465 462 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 TAL2Q16559 108 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 KLHL12Q53G59 568 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 APOBEC3HQ6NTF7 200 aaKnown RBP2.81□□□□□ -1.96
SYNE2-210ENST00000553455 SLC25A34Q6PIV7 304 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 PID1Q7Z2X4 250 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 SETD3Q86TU7 594 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-210ENST00000553455 STK40Q8N2I9 435 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 OR2M7Q8NG81 312 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 NDNFQ8TB73 568 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 ZFAND1Q8TCF1 268 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 WDR34Q96EX3 536 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 ZNF649Q9BS31 505 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 ANKHQ9HCJ1 492 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 STMN3Q9NZ72 180 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 TFR2Q9UP52 801 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 TRAV8-7A0A075B6U6 113 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 IGKV1-6A0A0C4DH72 117 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 TVP23AA6NH52 213 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 H7C2Y5 167 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 PRMT5O14744 637 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-210ENST00000553455 POLR1CO15160 346 aaPredicted RBP2.8□□□□□ -1.96
SYNE2-210ENST00000553455 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 RHOCP08134 193 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 CD9P21926 228 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 P2RY2P41231 377 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 SP6Q3SY56 376 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 PDCL2Q8N4E4 241 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 OR5M1Q8NGP8 315 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 LINC00574Q9H8X3 128 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 CSNK1G1Q9HCP0 422 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 DDIT4Q9NX09 232 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 CFL2Q9Y281 166 aa2.8□□□□□ -1.96
SYNE2-210ENST00000553455 IGHV3OR16-8A0A075B7F1 116 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 LOC102724200A0A096LPH7 203 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-210ENST00000553455 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 SEC14L6B5MCN3 397 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 M0R1B8 84 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 NDUFS8O00217 210 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 IGKV1D-16P01601 117 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 TGFBR1P36897 503 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 GRB2P62993 217 aaKnown RBP2.79□□□□□ -1.96
SYNE2-210ENST00000553455 FUT5Q11128 374 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 KPRPQ5T749 579 aaPredicted RBP2.79□□□□□ -1.96
SYNE2-210ENST00000553455 HHATQ5VTY9 493 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 ORMDL3Q8N138 153 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 SYS1Q8N2H4 156 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 GPR82Q96P67 336 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 UTP23Q9BRU9 249 aaKnown RBP2.79□□□□□ -1.96
SYNE2-210ENST00000553455 SND1-IT1Q9HBX3 110 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 C6orf50Q9HD87 102 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 GPR179Q6PRD1 2367 aa2.79□□□□□ -1.96
SYNE2-210ENST00000553455 TMEM72A0PK05 275 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 ISPDA4D126 451 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 C16orf90A8MZG2 172 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 GATCO43716 136 aaKnown RBP2.78□□□□□ -1.96
SYNE2-210ENST00000553455 NDUFS5O43920 106 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 OR7C2O60412 319 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 LIPCP11150 499 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 MAD2L1BPQ15013 274 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-210ENST00000553455 FBXL19-AS1Q494R0 122 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 CDNFQ49AH0 187 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 TTC32Q5I0X7 151 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 MED27Q6P2C8 311 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 PRSS54Q6PEW0 395 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 CA13Q8N1Q1 262 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 LINC00337Q8N6G1 96 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 APCDD1LQ8NCL9 501 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 OR52N1Q8NH53 320 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 KLF14Q8TD94 323 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-210ENST00000553455 LRRC39Q96DD0 335 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 MRPL48Q96GC5 212 aaKnown RBP2.78□□□□□ -1.96
SYNE2-210ENST00000553455 ORC6Q9Y5N6 252 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 ENPP4Q9Y6X5 453 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 SVILO95425 2214 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 SIGLEC1Q9BZZ2 1709 aa2.78□□□□□ -1.96
SYNE2-210ENST00000553455 COL1A2P08123 1366 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 CEACAM18A8MTB9 384 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 SPOPO43791 374 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 SC5DO75845 299 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 SCO1O75880 301 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 MAS1P04201 325 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 CD5P06127 495 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 S100A9P06702 114 aaKnown RBP2.77□□□□□ -1.97
SYNE2-210ENST00000553455 IVLP07476 585 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 BGNP21810 368 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 ADIGQ0VDE8 80 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 LINC00303Q3SY05 128 aa2.77□□□□□ -1.97
SYNE2-210ENST00000553455 THOC7Q6I9Y2 204 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms