RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MCTS1Q9ULC4 181 aaKnown RBP16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 KMT2EQ8IZD2 1858 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 A0A0D9SG52 128 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 FAM230AA0A1W2PPH8 454 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 hCG_1807616A0A1W2PRN6 198 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 SERPINE3A8MV23 424 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 TERTO14746 1132 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 SPRY1O43609 319 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 IGHV3-9P01782 118 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 OR3A2P47893 321 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 PLA2G2CQ5R387 149 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 RFPL4BQ6ZWI9 263 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 PEG10Q86TG7 708 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM185AQ8NFB2 350 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 FAM173AQ9BQD7 235 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 RTBDNQ9BSG5 229 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 C1QTNF6Q9BXI9 259 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 WDR13Q9H1Z4 485 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF703Q9H7S9 590 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 OSGIN2Q9Y236 505 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 RNF222A6NCQ9 220 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 EEF1E1-BLOC1S5C9J1V9 151 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 HTR3BO95264 441 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 CRYZL1O95825 349 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 RLN2P04090 185 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 FPR2P25090 351 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 SRYQ05066 204 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 ATXN7L3Q14CW9 347 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 TSPO2Q5TGU0 170 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 ABHD17BQ5VST6 288 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 JMJD6Q6NYC1 403 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 KCNRGQ8N5I3 272 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 RBPMSQ93062 196 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 EHFQ9NZC4 300 aa16.12■□□□□ 0.17
PRPF40B-208ENST00000548436 IGKV1D-8A0A087WSZ0 117 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 PLATP00750 562 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 LHX2P50458 406 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 TAS2R46P59540 309 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 SIGIRRQ6IA17 410 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 GPR87Q9BY21 358 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF581Q9P0T4 197 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF407Q9C0G0 2248 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 DNAJC13O75165 2243 aa16.11■□□□□ 0.17
PRPF40B-208ENST00000548436 FIGNL2A6NMB9 653 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 MMP7P09237 267 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 SERPINF1P36955 418 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 SUPT4H1P63272 117 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF92Q03936 586 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF345Q14585 488 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 BEX5Q5H9J7 111 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM42Q69YG0 159 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 CLEC18BQ6UXF7 455 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 OVCH2Q7RTZ1 564 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 OR5AP2Q8NGF4 316 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 OR5M9Q8NGP3 310 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM45BQ96B21 275 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 VRK1Q99986 396 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 HDHD3Q9BSH5 251 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 ZNF701Q9NV72 531 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PLEKHJ1Q9NW61 149 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 SDHAF2Q9NX18 166 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PRR13Q9NZ81 148 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 TMA7Q9Y2S6 64 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 C13orf42A0A1B0GVH6 325 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 C5orf51A6NDU8 294 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 MFSD2BA6NFX1 497 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 C21orf140B9A014 251 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 MSTNO14793 375 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 CA11O75493 328 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 OR2F2O95006 317 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 SFT2D2O95562 160 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PCBD1P61457 104 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 FAM3AP98173 230 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 OR2F1Q13607 317 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 CNN3Q15417 329 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 SLC9A3R2Q15599 337 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 NKAPLQ5M9Q1 402 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 DCAF10Q5QP82 559 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PDSS1Q5T2R2 415 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM17Q86X19 198 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 ADAMTS17Q8TE56 1095 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 ST8SIA2Q92186 375 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 MICU1Q9BPX6 476 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 METTL9Q9H1A3 318 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 PPA2Q9H2U2 334 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 NARFLQ9H6Q4 476 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 MED9Q9NWA0 146 aa16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 NOSIPQ9Y314 301 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-208ENST00000548436 IGKV3D-15A0A087WSY6 115 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 hCG_38984A0A1B0GV85 526 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 NRASP01111 189 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 SERPINA5P05154 406 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 PRKACBP22694 351 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 GLRA1P23415 457 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 CLDN18P56856 261 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 ARL6IP1Q15041 203 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 RSU1Q15404 277 aa16.09■□□□□ 0.17
PRPF40B-208ENST00000548436 OR1C1Q15619 314 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms