RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GTF3C1Q12789 2109 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 KIAA0232Q92628 1395 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SMIM26A0A096LP01 95 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TRAV8-6A0A0B4J262 113 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 IGHV1OR15-9A0A0B4J2B8 117 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 IGHV5-10-1A0A0J9YXX1 117 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 A0A0U1RQV1 116 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 C1orf232A0A0U1RR37 186 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 KRBOX1C9JBD0 128 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 J3QT63 122 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 M0QXV9 152 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 BET1O15155 118 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 UBDO15205 165 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TOX3O15405 576 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SOCS1O15524 211 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SHOX2O60902 331 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 YIF1AO95070 293 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PTTG1O95997 202 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TRBV12-3P01733 135 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PCCAP05165 728 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PAX6P26367 422 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PSMB5P28074 263 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 HOXA9P31269 272 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 RPA3P35244 121 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 APLNRP35414 380 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TTPAP49638 278 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 LHX2P50458 406 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 XKP51811 444 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PLTPP55058 493 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 RAB38P57729 211 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 RPL23P62829 140 aaKnown RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 CRADDP78560 199 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PNOCQ13519 176 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 EBI3Q14213 229 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PIGHQ14442 188 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 CEACAM16Q2WEN9 425 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TTC32Q5I0X7 151 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TIMM23BQ5SRD1 257 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 MFSD14CQ5VZR4 134 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TMEM236Q5W0B7 351 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 FBXW9Q5XUX1 488 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 HBMQ6B0K9 141 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 C12orf56Q8IXR9 622 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 LGI3Q8N145 548 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 ATPAF2Q8N5M1 289 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 ZNF433Q8N7K0 673 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 Q8N976 141 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 OR8G5Q8NG78 346 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 OR4K17Q8NGC6 315 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 OR5AK3PQ8NH89 298 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SFXN5Q8TD22 340 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 C15orf40Q8WUR7 153 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 IFT81Q8WYA0 676 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 ING5Q8WYH8 240 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 OR5P2Q8WZ92 322 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 HGDQ93099 445 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 RERGQ96A58 199 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 OR10C1Q96KK4 312 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 BMFQ96LC9 184 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 RILPQ96NA2 401 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 HSD17B10Q99714 261 aaKnown RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 HDHD3Q9BSH5 251 aaPredicted RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 TMED9Q9BVK6 235 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SLC38A10Q9HBR0 1119 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 ABCB9Q9NP78 766 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SIRT7Q9NRC8 400 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 DDX19AQ9NUU7 478 aaKnown RBP1.51□□□□□ -2.17
LMNB1-207ENST00000494185 C1orf109Q9NX04 203 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 DDIT4Q9NX09 232 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 NKIRAS1Q9NYS0 192 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 ANXA10Q9UJ72 324 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SCML1Q9UN30 329 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 PSG11Q9UQ72 335 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 SNX24Q9Y343 169 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 CDC42BPBQ9Y5S2 1711 aa1.51□□□□□ -2.17
LMNB1-207ENST00000494185 NPHP4O75161 1426 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 ABCB11O95342 1321 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 MAP3K15Q6ZN16 1313 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IGKV1-27A0A075B6S5 117 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 A0A0A6YYH2 397 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TRAV19A0A0A6YYK7 116 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IGHV6-1A0A0B4J1U7 121 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 KIR2DS1A0A191URI9 304 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 A0A1B0GVX0 72 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 A0A1W2PRG6 482 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 FABP12A6NFH5 140 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 GOLGA6L10A6NI86 522 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 A6NJ64 397 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 KLRC4-KLRK1H3BQV0 150 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TMX2-CTNND1H3BSU7 103 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 MANBAO00462 879 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 BPY2O14599 106 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 FABP7O15540 132 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 GCM2O75603 506 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 REM1O75628 298 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 CRTAPO75718 401 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 GLSO94925 669 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 RCBTB2O95199 551 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TNFAIP8O95379 198 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms