RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 OPN1SWP03999 348 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SERPIND1P05546 499 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 BCHEP06276 602 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 HTR1AP08908 422 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 OCM2P0CE71 109 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 OCMP0CE72 109 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 MGMTP16455 207 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 HNF1AP20823 631 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PCMT1P22061 227 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 HNRNPA2B1P22626 353 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 FGF9P31371 208 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 IFNA8P32881 189 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 GGT2P36268 569 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 POLR2IP36954 125 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PTGDSP41222 190 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 P2RY2P41231 377 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SSR2P43308 183 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 RANBP1P43487 201 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 IDH2P48735 452 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SMIM11AP58511 58 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 EMX1Q04741 257 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 TGM3Q08188 693 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 DGCR6Q14129 220 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 CST6Q15828 149 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 EXOC3L2Q2M3D2 409 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 RGS21Q2M5E4 152 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 TRIM16LQ309B1 348 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 KLF17Q5JT82 389 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 FAM78AQ5JUQ0 283 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SYT6Q5T7P8 510 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PIP5KL1Q5T9C9 394 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 UBE2UQ5VVX9 321 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 KHDRBS2Q5VWX1 349 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SAXO2Q658L1 398 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 ADNP2Q6IQ32 1131 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 REEP3Q6NUK4 255 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 AHSA2Q719I0 299 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 GALNT10Q86SR1 603 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 MOB3BQ86TA1 216 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 TRIM69Q86WT6 500 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 VRK2Q86Y07 508 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 MMAAQ8IVH4 418 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZNF547Q8IVP9 402 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 ENTHD1Q8IYW4 607 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 STX19Q8N4C7 294 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 LINC00471Q8N535 108 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR4D5Q8NGN0 318 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR5AR1Q8NGP9 310 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR5AK3PQ8NH89 298 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SFXN5Q8TD22 340 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 FGF13Q92913 245 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 MAL2Q969L2 176 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 CIDECQ96AQ7 238 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 TAMM41Q96BW9 452 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 NEURL3Q96EH8 262 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 COX14Q96I36 57 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 TMEM101Q96IK0 257 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PLEKHA8Q96JA3 519 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 Q96MT0 163 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 GAL3ST1Q99999 423 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 COPS4Q9BT78 406 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 MS4A8Q9BY19 250 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PRRG3Q9BZD7 231 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 NAA50Q9GZZ1 169 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 RACGAP1Q9H0H5 632 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 DUSP21Q9H596 190 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 ACOT13Q9NPJ3 140 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 PRSS16Q9NQE7 514 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 FAIMQ9NVQ4 179 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 CLN6Q9NWW5 311 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 SEC14L3Q9UDX4 400 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 RAB23Q9ULC3 237 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 AK6Q9Y3D8 172 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 HEBP2Q9Y5Z4 205 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 ENPP4Q9Y6X5 453 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 KIAA0100Q14667 2235 aaKnown RBP2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 NUMA1Q14980 2115 aa2.98□□□□□ -1.93
HMGB3P6-201ENST00000444896 IGKV1D-8A0A087WSZ0 117 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 A0A1B0GUS0 222 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 IRGMA1A4Y4 181 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 LRP5LA4QPB2 252 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SNTNA6NMZ2 147 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 TMX2-CTNND1H3BSU7 103 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 FAAHO00519 579 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 PLPP1O14494 284 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ABCD4O14678 606 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 AIREO43918 545 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CXCL13O43927 109 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 OR10H3O60404 316 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ZNF780AO75290 641 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 SNAPINO95295 136 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 LGI1O95970 557 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 IGHG4P01861 327 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CDK1P06493 297 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 ALOX5P09917 674 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 PIPP12273 146 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 RPA2P15927 270 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CD36P16671 472 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CD1BP29016 333 aa2.97□□□□□ -1.93
HMGB3P6-201ENST00000444896 CMPK1P30085 196 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms