RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	OR1K1	Q8NGR3	316 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR2T4	Q8NH00	348 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MUCL1	Q96DR8	90 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NMNAT3	Q96T66	252 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FOXB1	Q99853	325 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MED18	Q9BUE0	208 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ACTR6	Q9GZN1	396 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SYT4	Q9H2B2	425 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RNF121	Q9H920	327 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SEC61A2	Q9H9S3	476 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ABCB9	Q9NP78	766 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	G6PC2	Q9NQR9	355 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CMC2	Q9NRP2	79 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ING3	Q9NXR8	418 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ONECUT1	Q9UBC0	465 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OPN4	Q9UHM6	478 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PPP1R3C	Q9UQK1	317 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	POLR1D	Q9Y2S0	133 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	GOLT1B	Q9Y3E0	138 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TBL2	Q9Y4P3	447 aa	Known RBP	5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NPTN	Q9Y639	398 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MGA	Q8IWI9	3026 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FAM208B	Q5VWN6	2430 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ASPM	Q8IZT6	3477 aa		5.37	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MYO7B	Q6PIF6	2116 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DOCK7	Q96N67	2140 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638		A0A1B0GV72	72 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZAR1L	A6NP61	321 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SMLR1	H3BR10	107 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC2A10	O95528	541 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MT-ND5	P03915	603 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	LCAT	P04180	440 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	COX6B1	P14854	86 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF823	P16415	610 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FAH	P16930	419 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NDUFB7	P17568	137 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	COX5A	P20674	150 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	EDNRA	P25101	427 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DCK	P27707	260 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	UGT2B10	P36537	528 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RPL35	P42766	123 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CDKN2A	P42771	156 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	KIR2DL3	P43628	341 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RAB9A	P51151	201 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PRKX	P51817	358 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CDC42	P60953	191 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ERVS71-1	P61550	626 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RPS16	P62249	146 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	RBX1	P62877	108 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PITPNA	Q00169	270 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ASAH1	Q13510	395 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CRMP1	Q14194	572 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CDSN	Q15517	529 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	BSX	Q3C1V8	233 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	AKIRIN2	Q53H80	203 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TIMM23B	Q5SRD1	257 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	C10orf128	Q5T292	105 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OGFRL1	Q5TC84	451 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TMEM236	Q5W0B7	351 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TTC23	Q5W5X9	447 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ACSM5	Q6NUN0	579 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF544	Q6NX49	715 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TMEM88	Q6PEY1	159 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	SLC25A47	Q6Q0C1	308 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	STAC2	Q6ZMT1	411 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	P2RY8	Q86VZ1	359 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	STX19	Q8N4C7	294 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	DHRSX	Q8N5I4	330 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TMEM185A	Q8NFB2	350 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	PROKR2	Q8NFJ6	384 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	STXBP6	Q8NFX7	210 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR56B1	Q8NGI3	324 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR5H6	Q8NGV6	325 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	CYGB	Q8WWM9	190 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	APOL4	Q9BPW4	351 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TMED9	Q9BVK6	235 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	C1orf43	Q9BWL3	253 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	GABARAPL3	Q9BY60	117 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	YTHDF1	Q9BYJ9	559 aa	Known RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FN3K	Q9H479	309 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TOR3A	Q9H497	397 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	BIN3	Q9NQY0	253 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	ZNF226	Q9NYT6	803 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TREM2	Q9NZC2	230 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FLVCR2	Q9UPI3	526 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	B9D1	Q9UPM9	204 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	AMDHD2	Q9Y303	409 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	MED12L	Q86YW9	2145 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	EPG5	Q9HCE0	2579 aa		5.36	□□□□□ -1.55
ECHDC1-208	ENST00000436638	LOC400499	M0QZD8	3231 aa		5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638	LOC100130705	A0A1B0GUX0	176 aa		5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638		A0A1W2PQL4	384 aa	Predicted RBP	5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638	OR5H1	A6NKK0	313 aa		5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FAM183A	A6NL82	134 aa		5.35	□□□□□ -1.55
ECHDC1-208	ENST00000436638	FAM171A2	A8MVW0	826 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms