RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 HSPA12AO43301 675 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 DIRAS3O95661 229 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 AVPP01185 164 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CD82P27701 267 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CD40LGP29965 261 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 OC90Q02509 493 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GUCA2AQ02747 115 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 RAB31Q13636 194 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF100Q8IYN0 542 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GCNT2Q8N0V5 402 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR137CQ8N3F9 429 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CHPT1Q8WUD6 406 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 NUDT16L1Q9BRJ7 211 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 TRAPPC4Q9Y296 219 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 NAP1L6A6NFF2 107 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GCSHP23434 173 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 LAP3P28838 519 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 EIF1P41567 113 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ACTBP60709 375 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 RAC1P63000 192 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ACTG1P63261 375 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ETV3LQ6ZN32 361 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF433Q8N7K0 673 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 OR6N1Q8NGY5 312 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CORO2AQ92828 525 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CDH20Q9HBT6 801 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ZFP64Q9NPA5 681 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 KLK11Q9UBX7 282 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 IQCMA0A1B0GVH7 501 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF785A8K8V0 405 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM166BA8MTA8 275 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CDK2AP1O14519 115 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 EIF4E2O60573 245 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ADH6P28332 368 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 IL2RGP31785 369 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ID4P47928 161 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 DLX6P56179 175 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 PLCXD2Q0VAA5 305 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 NSUN5P2Q63ZY6 315 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GPR139Q6DWJ6 353 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CLVS1Q8IUQ0 354 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 MS4A15Q8N5U1 240 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF709Q8N972 641 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ST8SIA4Q92187 359 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 TAF15Q92804 592 aaKnown RBP eCLIP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 RITA1Q96K30 269 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 DMRTB1Q96MA1 342 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 FAIMQ9NVQ4 179 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 KCNAB3O43448 404 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 CNR1P21554 472 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 TNFSF8P32971 234 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 NAA10P41227 235 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 SEC61A1P61619 476 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 KLF9Q13886 244 aaPredicted RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 NEDD8Q15843 81 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 ALG10Q5BKT4 473 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 IDNKQ5T6J7 187 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC27A4Q6P1M0 643 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 GDPGP1Q6ZNW5 385 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 KCTD20Q7Z5Y7 419 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 OR51G2Q8NGK0 314 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 OR8J1Q8NGP2 316 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 TRUB1Q8WWH5 349 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 POTEKPQ9BYX7 375 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 HIPK2Q9H2X6 1198 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 SMURF1Q9HCE7 757 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 LRFN1Q9P244 771 aa4.74□□□□□ -1.65
TOPBP1-201ENST00000260810 A0A0G2JRQ6 117 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 UNC119BA6NIH7 251 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 A8MVM7 634 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CREBL2O60519 120 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 VSIG10L2P0DP72 767 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RIDAP52758 137 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM27E3Q08E93 113 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PHOSPHO1Q8TCT1 267 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM45BQ96B21 275 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 MSI2Q96DH6 328 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SLC22A4Q9H015 551 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 SDHAF2Q9NX18 166 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CTSZQ9UBR2 303 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 FKBP7Q9Y680 259 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 HERC1Q15751 4861 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 B8ZZF3 427 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CXCL13O43927 109 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 VSIG8P0DPA2 414 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 RPL27P61353 136 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PUDPQ08623 228 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 FAM27BQ5VT28 67 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 PLET1Q6UQ28 207 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CXorf67Q86X51 503 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 ZNF420Q8TAQ5 688 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TMEM80Q96HE8 168 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 TBX5Q99593 518 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GHITMQ9H3K2 345 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CRLF2Q9HC73 371 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 CD3GP09693 182 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 DANCRP0C864 163 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 GCH1P30793 250 aa4.73□□□□□ -1.65
TOPBP1-201ENST00000260810 APLNRP35414 380 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms