RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GPER1Q99527 375 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 ACTR6Q9GZN1 396 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 RHOFQ9HBH0 211 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF629Q9UEG4 869 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 CGGBP1Q9UFW8 167 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-201ENST00000238688 N6AMT1Q9Y5N5 214 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 MPC1Q9Y5U8 109 aa11.39□□□□□ -0.59
SLIRP-201ENST00000238688 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 FAM240BA0A1B0GVZ2 78 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 H7C417 338 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 PLA2G10O15496 165 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 EEF1E1O43324 174 aaKnown RBP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 AKR7A2O43488 359 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 GMDSO60547 372 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 LMX1BO60663 402 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 PFDN1O60925 122 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 CA11O75493 328 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 LPLP06858 475 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 MELTFP08582 738 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 GSTP1P09211 210 aaKnown RBP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 PATE4P0C8F1 98 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 SLC6A1P30531 599 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 PRSS3P35030 304 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 ATP1B3P54709 279 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF92Q03936 586 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 TLE4Q04727 773 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 PNLIPRP3Q17RR3 467 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 ASCL4Q6XD76 172 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 MDP1Q86V88 176 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 SNX29P2Q8IUI4 249 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF584Q8IVC4 421 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 DMRTC2Q8IXT2 367 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 SAXO1Q8IYX7 474 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 OR56B1Q8NGI3 324 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 UBASH3BQ8TF42 649 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 C11orf54Q9H0W9 315 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 ATG5Q9H1Y0 275 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 CDH20Q9HBT6 801 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 KCNJ16Q9NPI9 418 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 MTFP1Q9UDX5 166 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 MRPS7Q9Y2R9 242 aaKnown RBP11.38□□□□□ -0.59
SLIRP-201ENST00000238688 CACNG2Q9Y698 323 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 CELSR1Q9NYQ6 3014 aa11.38□□□□□ -0.59
SLIRP-201ENST00000238688 A0A1B0GVG6 124 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 FUOMA2VDF0 154 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 OR5H1A6NKK0 313 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 OR5B21A6NL26 309 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 H3BSH0 61 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 RBBP9O75884 186 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 IGLV1-44P01699 117 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TRAPPC2P0DI81 140 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TRAPPC2BP0DI82 140 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TBPP20226 339 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 CPT2P23786 658 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 ACKR3P25106 362 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 GDNFP39905 211 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 RFX2P48378 723 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 FOXG1P55316 489 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-201ENST00000238688 BTG1P62324 171 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 KLF9Q13886 244 aaPredicted RBP11.37□□□□□ -0.59
SLIRP-201ENST00000238688 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 HIKESHIQ53FT3 197 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TIMM23BQ5SRD1 257 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 C9orf135Q5VTT2 229 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 OLFML2AQ68BL7 652 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 VWA1Q6PCB0 445 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 GLIPR1L1Q6UWM5 242 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 ZNF101Q8IZC7 436 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 NAXEQ8NCW5 288 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 BORCS8Q96FH0 119 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TM2D1Q9BX74 207 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
SLIRP-201ENST00000238688 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
SLIRP-201ENST00000238688 ANKRD20A5PA0PJZ0 165 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A10PA6NDY2 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A8PA6NJQ4 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A7PA6NKC0 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A22PA8MWA6 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A23PA8MXZ1 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 ORC5O43913 435 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 RAD51DO75771 328 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 KDM4BO94953 1096 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 RAC2P15153 192 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 RAD52P43351 418 aa11.36□□□□□ -0.59
SLIRP-201ENST00000238688 CBX5P45973 191 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms