RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCDC22O60826 627 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 SLC35G6P0C7Q6 338 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 PTNP21246 168 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 PRKACBP22694 351 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ATP5J2P56134 94 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 MLF1P58340 268 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ELF3P78545 371 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ST3GAL4Q11206 333 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 DMC1Q14565 340 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 STK38Q15208 465 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 NDUFAF6Q330K2 333 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 FAM58AQ8N1B3 248 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ZCCHC24Q8N2G6 241 aaKnown RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 TMEM105Q8N8V8 129 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ASCC1Q8N9N2 400 aaKnown RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 ST20-AS1Q8NBB2 130 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 OR51A7Q8NH64 312 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 CENPNQ96H22 339 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 NAPGQ99747 312 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 MAP1LC3CQ9BXW4 147 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 TM6SF2Q9BZW4 377 aa2.85□□□□□ -1.95
SYNE2-210ENST00000553455 MARCOQ9UEW3 520 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 COL4A4P53420 1690 aaPredicted RBP2.85□□□□□ -1.95
SYNE2-210ENST00000553455 A0A1W2PQ67 120 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 GSTTP1A0A1W2PQM5 241 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 BTNL10A8MVZ5 291 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 LGALS9O00182 355 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 CDRT1O95170 752 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 CELP19835 753 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 GALR1P47211 349 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 RPL31P62899 125 aaKnown RBP2.84□□□□□ -1.95
SYNE2-210ENST00000553455 XIAPP98170 497 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 IGFL1Q6UW32 110 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 SLC7A5P1Q8MH63 180 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 CYB561A3Q8NBI2 242 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 RNF170Q96K19 258 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 ZFP3Q96NJ6 502 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 ALS2CR12Q96Q35 445 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 C20orf144Q9BQM9 153 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 ING2Q9H160 280 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 LZTFL1Q9NQ48 299 aa2.84□□□□□ -1.95
SYNE2-210ENST00000553455 BZW2Q9Y6E2 419 aaKnown RBP2.84□□□□□ -1.95
SYNE2-210ENST00000553455 BRWD3Q6RI45 1802 aa2.84□□□□□ -1.96
SYNE2-210ENST00000553455 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 J3QT63 122 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 MYL12BO14950 172 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 ALOX12BO75342 701 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 P01737 135 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 RPN2P04844 631 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 PAX6P26367 422 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 IL3RAP26951 378 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 MTPNP58546 118 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 C2orf54Q08AI8 447 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 DNLZQ5SXM8 178 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 C6orf183Q5T699 404 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 DUPD1Q68J44 220 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 DEGS2Q6QHC5 323 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 LINC00469Q8N7U9 141 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 OR2Z1Q8NG97 314 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 OR1S1Q8NH92 325 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 SFXN5Q8TD22 340 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 Q96MT0 163 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 IP6K3Q96PC2 410 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 TSNAXQ99598 290 aaKnown RBP2.83□□□□□ -1.96
SYNE2-210ENST00000553455 SCRT1Q9BWW7 348 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 ULBP2Q9BZM5 246 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 STMN4Q9H169 189 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-210ENST00000553455 CA10Q9NS85 328 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 TAS2R5Q9NYW4 299 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 SYNRGQ9UMZ2 1314 aa2.83□□□□□ -1.96
SYNE2-210ENST00000553455 TRAV8-6A0A0B4J262 113 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 RFXANKO14593 260 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 LHBP01229 141 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 ZNF14P17017 642 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-210ENST00000553455 NELFEP18615 380 aaKnown RBP2.82□□□□□ -1.96
SYNE2-210ENST00000553455 NTF3P20783 257 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 PSMB5P28074 263 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 HTR2CP28335 458 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 TAS2R43P59537 309 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 TAS2R60P59551 318 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 FAM27D1Q5T7N8 215 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 LRRC52Q8N7C0 313 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 OR4M2Q8NGB6 313 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 ING5Q8WYH8 240 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 CIDECQ96AQ7 238 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-210ENST00000553455 RMI2Q96E14 147 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 SNF8Q96H20 258 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 MARVELD1Q9BSK0 173 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 V9GYY9 64 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 JCADQ9P266 1359 aa2.82□□□□□ -1.96
SYNE2-210ENST00000553455 AQRO60306 1485 aaKnown RBP eCLIP2.82□□□□□ -1.96
SYNE2-210ENST00000553455 ANKRD20A5PA0PJZ0 165 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 CENPBD1B2RD01 187 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 K7EN84 100 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 VAPBO95292 243 aa2.81□□□□□ -1.96
SYNE2-210ENST00000553455 MMP7P09237 267 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms