RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CPOQ8IVL8 374 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 C11orf44Q8N8P7 122 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 CSNK2A3Q8NEV1 391 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 OR52H1Q8NGJ2 320 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 OR10Z1Q8NGY1 313 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 OTOSQ8NHW6 89 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 C12orf43Q96C57 262 aaKnown RBP9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 DUS3LQ96G46 650 aaKnown RBP9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNF488Q96MN9 340 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 RTL8AQ9BWD3 113 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 MAGIXQ9H6Y5 334 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 REEP1Q9H902 201 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC25A10Q9UBX3 287 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNF222Q9UK12 451 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 ARL2BPQ9Y2Y0 163 aa9.42□□□□□ -0.9
PRPF40B-212ENST00000551111 A0A0G2JK05 382 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 ANXA2P2A6NMY6 339 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 OR2AT4A6NND4 320 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 G3V4G9 280 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 H3BN98 237 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 H3BUX3 64 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 LYNP07948 512 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 T-ENOLP0DO92 83 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 PRKACGP22612 351 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 POU1F1P28069 291 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 GABRA2P47869 451 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 UBE2E1P51965 193 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 BLVRAP53004 296 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 GNGT1P63211 74 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 IL5RAQ01344 420 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 GINS1Q14691 196 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 TMEM236Q5W0B7 351 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 C1orf122Q6ZSJ8 110 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 DHFR2Q86XF0 187 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 CMTM4Q8IZR5 234 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 BATF2Q8N1L9 274 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 C11orf42Q8N5U0 333 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 GIPC3Q8TF64 312 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 NPRL2Q8WTW4 380 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 SSX3Q99909 188 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 TTTY10Q9BZA0 68 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 OR51I2Q9H344 312 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 YY1AP1Q9H869 796 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 C19orf12Q9NSK7 152 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 NLKQ9UBE8 527 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 LRP12Q9Y561 859 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 MPC1Q9Y5U8 109 aa9.41□□□□□ -0.9
PRPF40B-212ENST00000551111 A0A1W2PQ09 198 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 ZNF732B4DXR9 585 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 GPR37O15354 613 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 SLC2A5P22732 501 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 GLRA1P23415 457 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 CFL1P23528 166 aaKnown RBP9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 EEF1B2P24534 225 aaKnown RBP9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 TGFBR2P37173 567 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 CAV3P56539 151 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 SPATS1Q496A3 300 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 TRPM8Q7Z2W7 1104 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 MKXQ8IYA7 352 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 ZDHHC23Q8IYP9 409 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 ADGRG5Q8IZF4 528 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 CD177Q8N6Q3 437 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 PIFOQ8TCI5 191 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 LRTOMTQ8WZ04 291 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 DMRTB1Q96MA1 342 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 CHID1Q9BWS9 393 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 DNTTIP1Q9H147 329 aa9.4□□□□□ -0.9
PRPF40B-212ENST00000551111 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.91
PRPF40B-212ENST00000551111 ANKRD61A6NGH8 418 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 NKX6-3A6NJ46 265 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 TMEM210A6NLX4 147 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 PRR23D1E9PI22 279 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 M0R1W7 72 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 MAGEB4O15481 346 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 SYNGR1O43759 233 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 ANGPTL7O43827 346 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 CHST1O43916 411 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 PAHP00439 452 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 APOC1P02654 83 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 PRR23D2P0DMB1 279 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 ALOX5APP20292 161 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 EFNB2P52799 333 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 CDK5Q00535 292 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 HABP2Q14520 560 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 FAM98BQ52LJ0 330 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 FAM185AQ8N0U4 392 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 DYNAPQ8N1N2 210 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 BEND2Q8NDZ0 799 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 TMEM185AQ8NFB2 350 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms