RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 C1QTNF12Q5T7M4 302 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 CCDC28AQ8IWP9 274 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 ARRDC1Q8N5I2 433 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 CCDC54Q8NEL0 328 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 WBP1Q96G27 269 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 FOXB1Q99853 325 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 ST6GALNAC5Q9BVH7 336 aa16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 ELL3Q9HB65 397 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-208ENST00000548436 OR6C6A6NF89 314 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 CYTIPO60759 359 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 DUS4LO95620 317 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 NPY4RP50391 375 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 PSG4Q00888 419 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 FGL1Q08830 312 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 SCRN3Q0VDG4 424 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 KRTAP27-1Q3LI81 207 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 ZNF660Q6AZW8 331 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 TMEM65Q6PI78 240 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 KCTD9Q7L273 389 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 GALNTL5Q7Z4T8 443 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 OR6K3Q8NGY3 331 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 SCARB1Q8WTV0 552 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 PPP1R1CQ8WVI7 109 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 MAFIPQ8WZ33 124 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 SIGLEC12Q96PQ1 595 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 S100A13Q99584 98 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 C5orf66Q9H5L9 145 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 GPR132Q9UNW8 380 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 FREM1Q5H8C1 2179 aa16.16■□□□□ 0.18
PRPF40B-208ENST00000548436 NEURL1O76050 574 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 LCATP04180 440 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 NMBP08949 121 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CD59P13987 128 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 AMY2BP19961 511 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CALCRP30988 508 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 DLSTP36957 453 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 RFC3P40938 356 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CBX5P45973 191 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 ATP1B3P54709 279 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 C11orf87Q6NUJ2 197 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 OR5H2Q8NGV7 314 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 COQ8AQ8NI60 647 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 GPR35Q9HC97 309 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 POM121CA8CG34 1229 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 FAM25EA8MYX2 175 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 M0R296 226 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 AGTR1P30556 359 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 HTR5AP47898 357 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CAMK2BQ13554 666 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 SULF2Q8IWU5 870 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CPNE4Q96A23 557 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 TMEM230Q96A57 120 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 HES7Q9BYE0 225 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 WNT5BQ9H1J7 359 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 MED13Q9UHV7 2174 aa16.15■□□□□ 0.18
PRPF40B-208ENST00000548436 CELSR3Q9NYQ7 3312 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 DBX1A6NMT0 343 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 DHRS7CA6NNS2 312 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CEACAM18A8MTB9 384 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SHOXO15266 292 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SLC25A4P12235 298 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SNU13P55769 128 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 MTCP1P56278 107 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 RIPPLY2Q5TAB7 128 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SKA3Q8IX90 412 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 OR2M7Q8NG81 312 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 OR13G1Q8NGZ3 307 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CXorf58Q96LI9 332 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 OR2H1Q9GZK4 316 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 RDH8Q9NYR8 311 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 COMMD9Q9P000 198 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 BOKQ9UMX3 212 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 TNFSF18Q9UNG2 199 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 KNTC1P50748 2209 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 IGKV1-27A0A075B6S5 117 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SDCBPO00560 298 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SPDEFO95238 335 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CELA3AP09093 270 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CPT2P23786 658 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 TAS2R31P59538 309 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 RGS7BPQ6MZT1 257 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 PLXDC2Q6UX71 529 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 C6orf201Q7Z4U5 140 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 SLC51BQ86UW2 128 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 LHFPL1Q86WI0 220 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CSNK2A3Q8NEV1 391 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 DMRTA2Q96SC8 542 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 REG4Q9BYZ8 158 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 TIMM10BQ9Y5J6 103 aa16.14■□□□□ 0.17
PRPF40B-208ENST00000548436 CDX4O14627 284 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 ANGPTL7O43827 346 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM225BP0DP42 221 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 PI3P19957 117 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 GABRR1P24046 479 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 BAMBIQ13145 260 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 TMEM128Q5BJH2 165 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 AADACL3Q5VUY0 350 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 CDCP2Q5VXM1 449 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 SPSB1Q96BD6 273 aa16.13■□□□□ 0.17
PRPF40B-208ENST00000548436 Q96M66 194 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms