RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 KAAG1Q9UBP8 84 aa9.44□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF816-ZNF321PA0A0X1KG74 233 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 EI24O14681 340 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 CDIPTO14735 213 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 NPFFO15130 113 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 CLUP10909 449 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 SPI1P17947 270 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 DDOSTP39656 456 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 NAA10P41227 235 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 SLC15A1P46059 708 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 BLVRAP53004 296 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 SLC25A1P53007 311 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 FAM3AP98173 230 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 CDK5Q00535 292 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 EGR3Q06889 387 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 EIF2B1Q14232 305 aaKnown RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 PTGES3Q15185 160 aaKnown RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 RCN1Q15293 331 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 C2orf68Q2NKX9 166 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 LRRC10Q5BKY1 277 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 WDR82Q6UXN9 313 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 FAM57BQ71RH2 274 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 C11orf53Q8IXP5 236 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 PNKDQ8N490 385 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 OR1M1Q8NGA1 313 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 PAPOLGQ9BWT3 736 aaKnown RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 PPP1R3EQ9H7J1 279 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 DCLRE1BQ9H816 532 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 SNTG1Q9NSN8 517 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 H2AFY2Q9P0M6 372 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 ZNRD1Q9P1U0 126 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-203ENST00000546881 VPREB3Q9UKI3 123 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 NOTCH1P46531 2555 aa9.43□□□□□ -0.9
RAB5C-203ENST00000546881 MEIOCA2RUB1 952 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 RNASEK-C17orf49H0YIS7 233 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 TFF1P04155 84 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 CSF1P09603 554 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 SELLP14151 372 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 GSTT1P30711 240 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 ALDH3A2P51648 485 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 GRB2P62993 217 aaKnown RBP9.42□□□□□ -0.9
RAB5C-203ENST00000546881 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 SNCBQ16143 134 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 ZIK1Q3SY52 487 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-203ENST00000546881 ZBTB49Q6ZSB9 765 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 ERI1Q8IV48 349 aaKnown RBP9.42□□□□□ -0.9
RAB5C-203ENST00000546881 CPOQ8IVL8 374 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 LY6G5BQ8NDX9 201 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 OR6N2Q8NGY6 317 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 SGK3Q96BR1 496 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 DDOQ99489 341 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 MICU1Q9BPX6 476 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 C16orf95Q9H693 158 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 SP140LQ9H930 580 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF391Q9UJN7 358 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 RHBDD3Q9Y3P4 386 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 WNK1Q9H4A3 2382 aa9.42□□□□□ -0.9
RAB5C-203ENST00000546881 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
RAB5C-203ENST00000546881 A0A1W2PQ09 198 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 ANXA2P2A6NMY6 339 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-203ENST00000546881 M0R129 80 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 GLCEO94923 617 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 NDUFB7P17568 137 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 SAA4P35542 130 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 TGFBR2P37173 567 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 GSK3AP49840 483 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 ZNF121P58317 390 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-203ENST00000546881 CDC42P60953 191 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 HIST2H2BDQ6DRA6 164 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 Q8N7P7 452 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 NPRL2Q8WTW4 380 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 RPL3LQ92901 407 aaKnown RBP9.41□□□□□ -0.9
RAB5C-203ENST00000546881 PGAM5Q96HS1 289 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 INTS14Q96SY0 518 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 DCTN5Q9BTE1 182 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 RTL8AQ9BWD3 113 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 NMNAT2Q9BZQ4 307 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 OR10A2Q9H208 303 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 IMPAD1Q9NX62 359 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 HAO2Q9NYQ3 351 aa9.41□□□□□ -0.9
RAB5C-203ENST00000546881 hCG_38984A0A1B0GV85 526 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 ZAR1LA6NP61 321 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 GPR37O15354 613 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 PRODHO43272 600 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 AKR7A2O43488 359 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 PRKYO43930 277 aa9.4□□□□□ -0.9
RAB5C-203ENST00000546881 TSPAN9O75954 239 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms