RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 RTN4IP1Q8WWV3 396 aaPredicted RBP3.57□□□□□ -1.84
LEMD3-206ENST00000545026 TMEM159Q96B96 161 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 S100PBPQ96BU1 408 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 ALS2CR12Q96Q35 445 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 TSNAXQ99598 290 aaKnown RBP3.57□□□□□ -1.84
LEMD3-206ENST00000545026 YEATS2Q9ULM3 1422 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 PPIL1Q9Y3C6 166 aa3.57□□□□□ -1.84
LEMD3-206ENST00000545026 TSPOAP1O95153 1857 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 BRCA1P38398 1863 aaKnown RBP3.56□□□□□ -1.84
LEMD3-206ENST00000545026 TUBGCP6Q96RT7 1819 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 TRAV8-4A0A0B4J246 113 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 RFXANKO14593 260 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 RBBP9O75884 186 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 P01737 135 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 PRKACBP22694 351 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 HTR2CP28335 458 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 GALR1P47211 349 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 CMC4P56277 68 aaPredicted RBP3.56□□□□□ -1.84
LEMD3-206ENST00000545026 DMC1Q14565 340 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 NDUFAF6Q330K2 333 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 NEGR1Q7Z3B1 354 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 Q96MT0 163 aa3.56□□□□□ -1.84
LEMD3-206ENST00000545026 IGHV6-1A0A0B4J1U7 121 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 IGHV1-3A0A0C4DH29 117 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 ANKRD20A5PA0PJZ0 165 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 H7C2Y5 167 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 RPN2P04844 631 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 IFFO1Q0D2I5 559 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 PRSS8Q16651 343 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 FAM27D1Q5T7N8 215 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 ZCCHC24Q8N2G6 241 aaKnown RBP3.55□□□□□ -1.84
LEMD3-206ENST00000545026 SLC35G3Q8N808 338 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 TMEM105Q8N8V8 129 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 CYB561A3Q8NBI2 242 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 SFXN5Q8TD22 340 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 SNF8Q96H20 258 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 ZNF717Q9BY31 904 aaPredicted RBP3.55□□□□□ -1.84
LEMD3-206ENST00000545026 STMN4Q9H169 189 aaPredicted RBP3.55□□□□□ -1.84
LEMD3-206ENST00000545026 ZSCAN16Q9H4T2 348 aaPredicted RBP3.55□□□□□ -1.84
LEMD3-206ENST00000545026 CFL2Q9Y281 166 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 V9GYY9 64 aa3.55□□□□□ -1.84
LEMD3-206ENST00000545026 JCADQ9P266 1359 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 TRAV8-6A0A0B4J262 113 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 A8MUU9 505 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 J3QT63 122 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ALOX12BO75342 701 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 PAX6P26367 422 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 IL3RAP26951 378 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ERFP50548 548 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 PID1Q7Z2X4 250 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 PDCL2Q8N4E4 241 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ZNF561Q8N587 486 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 RNF182Q8N6D2 247 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ST20-AS1Q8NBB2 130 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 OR4M2Q8NGB6 313 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 NDNFQ8TB73 568 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ZFAND1Q8TCF1 268 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 C20orf144Q9BQM9 153 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ZNF2Q9BSG1 426 aaPredicted RBP3.54□□□□□ -1.84
LEMD3-206ENST00000545026 ANKHQ9HCJ1 492 aa3.54□□□□□ -1.84
LEMD3-206ENST00000545026 BTNL10A8MVZ5 291 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 K7EM74 188 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 NDUFS8O00217 210 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 GATCO43716 136 aaKnown RBP3.53□□□□□ -1.84
LEMD3-206ENST00000545026 S100A9P06702 114 aaKnown RBP3.53□□□□□ -1.84
LEMD3-206ENST00000545026 RHOCP08134 193 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 MMP7P09237 267 aaPredicted RBP3.53□□□□□ -1.84
LEMD3-206ENST00000545026 OR5AL1P0C617 328 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 PSMB5P28074 263 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 PPP1CAP62136 330 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 ELF3P78545 371 aaPredicted RBP3.53□□□□□ -1.84
LEMD3-206ENST00000545026 TAL2Q16559 108 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 APOBEC3HQ6NTF7 200 aaKnown RBP3.53□□□□□ -1.84
LEMD3-206ENST00000545026 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 C6orf50Q9HD87 102 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 STMN3Q9NZ72 180 aa3.53□□□□□ -1.84
LEMD3-206ENST00000545026 TRAV8-7A0A075B6U6 113 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 TVP23AA6NH52 213 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 CENPBD1B2RD01 187 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 SEC14L6B5MCN3 397 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 PRMT5O14744 637 aaPredicted RBP3.52□□□□□ -1.85
LEMD3-206ENST00000545026 SPOPO43791 374 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 VAPBO95292 243 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 IVLP07476 585 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 CCDC172P0C7W6 258 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 PRSS3P35030 304 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 TAS2R43P59537 309 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 DYNC1I2Q13409 638 aaKnown RBP3.52□□□□□ -1.85
LEMD3-206ENST00000545026 HHATQ5VTY9 493 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 IGFL1Q6UW32 110 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 OR6N2Q8NGY6 317 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 MRPL48Q96GC5 212 aaKnown RBP3.52□□□□□ -1.85
LEMD3-206ENST00000545026 UTP23Q9BRU9 249 aaKnown RBP3.52□□□□□ -1.85
LEMD3-206ENST00000545026 CA10Q9NS85 328 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 TAS2R5Q9NYW4 299 aa3.52□□□□□ -1.85
LEMD3-206ENST00000545026 TFR2Q9UP52 801 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms