RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 RNF170Q96K19 258 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 LYZL4Q96KX0 146 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 CCL13Q99616 98 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 PPP1R3EQ9H7J1 279 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 HAO2Q9NYQ3 351 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 DNAJB11Q9UBS4 358 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 KLHDC2Q9Y2U9 406 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 KPTNQ9Y664 436 aa13.37□□□□□ -0.27
DDX55-212ENST00000544738 IGHV1-69DA0A0B4J2H0 117 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 ZNF816-ZNF321PA0A0X1KG74 233 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 TMEM269A0A1B0GVZ9 245 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 G3V4G9 280 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 GSC2O15499 205 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 NDUFB3O43676 98 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 IGHV1-69P01742 117 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 VSIG8P0DPA2 414 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 ATP6V1B1P15313 513 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 TGM4P49221 684 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 PTGES3Q15185 160 aaKnown RBP13.36□□□□□ -0.27
DDX55-212ENST00000544738 CDONQ4KMG0 1287 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 LRRC10Q5BKY1 277 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 KCTD8Q6ZWB6 473 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 KRT74Q7RTS7 529 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 ZDHHC23Q8IYP9 409 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 SCCPDHQ8NBX0 429 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 OR5K1Q8NHB7 308 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 MED30Q96HR3 178 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 TCF7L1Q9HCS4 588 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 ACOXLQ9NUZ1 547 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 FAM53CQ9NYF3 392 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 RNF114Q9Y508 228 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 POMT1Q9Y6A1 747 aa13.36□□□□□ -0.27
DDX55-212ENST00000544738 A0A1B0GVI7 797 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 FCN3O75636 299 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 NDUFA7O95182 113 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 RASSF2P50749 326 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 DAPP51397 102 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 HCCSP53701 268 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 ACTR3P61158 418 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 ROM1Q03395 351 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 ZNF829Q3KNS6 432 aaPredicted RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 RUSC1-AS1Q66K80 236 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 FAM216BQ8N7L0 139 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 LY6G5BQ8NDX9 201 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 TBC1D15Q8TC07 691 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 RPL3LQ92901 407 aaKnown RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 LHX4Q969G2 390 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 UTP4Q969X6 686 aaKnown RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 RAB3IPQ96QF0 476 aaPredicted RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 CADM1Q9BY67 442 aaKnown RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 FAM206AQ9NX38 181 aa13.35□□□□□ -0.27
DDX55-212ENST00000544738 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
DDX55-212ENST00000544738 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 RIDAP52758 137 aaKnown RBP13.34□□□□□ -0.27
DDX55-212ENST00000544738 RPL15P61313 204 aaKnown RBP13.34□□□□□ -0.27
DDX55-212ENST00000544738 GNG3P63215 75 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 FAM189A2Q15884 450 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 BEAN1Q3B7T3 259 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 CEACAM21Q3KPI0 293 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 STUMQ69YW2 141 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 COMMD2Q86X83 199 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 OR5T2Q8NGG2 359 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 OR5A2Q8NGI9 324 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 HPSE2Q8WWQ2 592 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 SEH1LQ96EE3 360 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 OR8B4Q96RC9 309 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
DDX55-212ENST00000544738 MNTQ99583 582 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 KRT84Q9NSB2 600 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
DDX55-212ENST00000544738 A0A1B0GW55 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 CCDC182A6NF36 153 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 PSMD9O00233 223 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 AKR7A2O43488 359 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 PRKYO43930 277 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
DDX55-212ENST00000544738 MELTFP08582 738 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 MRPL3P09001 348 aaKnown RBP13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L2P0CJ85 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L3P0CJ86 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L4P0CJ87 422 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L5P0CJ88 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L6P0CJ89 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L7P0CJ90 424 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 GPM6AP51674 278 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 RIPPLY1Q0D2K3 151 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 BNIP1Q12981 228 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 IKZF1Q13422 519 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 ATP6AP1Q15904 470 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 ZBTB37Q5TC79 503 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 DUX4L9Q6RFH8 374 aaPredicted RBP13.33□□□□□ -0.28
DDX55-212ENST00000544738 METAP1DQ6UB28 335 aaPredicted RBP13.33□□□□□ -0.28
DDX55-212ENST00000544738 ZNF788Q6ZQV5 615 aa13.33□□□□□ -0.28
DDX55-212ENST00000544738 MEPCEQ7L2J0 689 aaKnown RBP13.33□□□□□ -0.28
DDX55-212ENST00000544738 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms