RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 ZNF98A6NK75 572 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 HSPB2A8KAH6 182 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 WISP2O76076 250 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 AKR1D1P51857 326 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 HSPB2Q16082 182 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 C10orf128Q5T292 105 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 GLT8D1Q68CQ7 371 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 GPX8Q8TED1 209 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 PRRG4Q9BZD6 226 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 SCPEP1Q9HB40 452 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 SPRR3Q9UBC9 169 aa13.39□□□□□ -0.27
CLPTM1-202ENST00000541297 GPR31O00270 319 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 CCSO14618 274 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 RAB3DO95716 219 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 CD8AP01732 235 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 AKR1C2P52895 323 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 AKR1C1Q04828 323 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 CATSPERDQ86XM0 798 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 NELFAQ9H3P2 528 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 UPB1Q9UBR1 384 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 TNFSF18Q9UNG2 199 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 R4GMQ9 66 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 SVILO95425 2214 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 H7C2Y5 167 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 SRSF10O75494 262 aaKnown RBP13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 ATG12O94817 140 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 SYNGR4O95473 234 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 MSR1P21757 451 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 FDX2Q6P4F2 183 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 TUSC5Q8IXB3 177 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 NABP1Q96AH0 204 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 SEH1LQ96EE3 360 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 ZDHHC11Q9H8X9 412 aa13.38□□□□□ -0.27
CLPTM1-202ENST00000541297 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 BCL2L11O43521 198 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 AMY2AP04746 511 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 RAB11BQ15907 218 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 C11orf87Q6NUJ2 197 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 GPR137CQ8N3F9 429 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 OR5M8Q8NGP6 311 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 SNIP1Q8TAD8 396 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 TSNAXQ99598 290 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 PDCD10Q9BUL8 212 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 CALHM2Q9HA72 323 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 OR52A1Q9UKL2 312 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 MCTS1Q9ULC4 181 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 NOSIPQ9Y314 301 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 TRAV17A0A0B4J275 112 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 LOC100289279A0A1B0GTE1 492 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 RNF222A6NCQ9 220 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 CEACAM4O75871 244 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 PRKXP51817 358 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 TAS2R19P59542 299 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 DHRS2Q13268 280 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 ATPAF1Q5TC12 328 aaPredicted RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF627Q7L945 461 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 PUSL1Q8N0Z8 303 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 PLPP7Q8NBV4 271 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 OR1S2Q8NGQ3 325 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 WNT2BQ93097 391 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 ADAT1Q9BUB4 502 aaKnown RBP13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 G6PC2Q9NQR9 355 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 PCDHB10Q9UN67 800 aa13.37□□□□□ -0.27
CLPTM1-202ENST00000541297 A0A1B0GTI1 187 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF878C9JN71 531 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 OR2F2O95006 317 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ACTL6AO96019 429 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 SLC2A1P11166 492 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 HSD11B1P28845 292 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 CBX5P45973 191 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF84P51523 738 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF133P52736 654 aaPredicted RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ACTBP60709 375 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ACTG1P63261 375 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 OR2F1Q13607 317 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 SNTB1Q13884 538 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 KCNMB1Q16558 191 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 KLHL24Q6TFL4 600 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 INTS12Q96CB8 462 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 DOCK7Q96N67 2140 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ZMAT3Q9HA38 289 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 MLXQ9UH92 298 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 DSPP15924 2871 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 DLL1O00548 723 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 MELTFP08582 738 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 H2AFB1P0C5Y9 115 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 CD34P28906 385 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ATP1B3P54709 279 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ENDOGQ14249 297 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 ZNF345Q14585 488 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 SCGB2B2Q4G0G5 96 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 PAN3Q58A45 887 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 DEGS2Q6QHC5 323 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 PIGMQ9H3S5 423 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 PNRC2Q9NPJ4 139 aaKnown RBP13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 COMMD9Q9P000 198 aa13.36□□□□□ -0.27
CLPTM1-202ENST00000541297 NDRG3Q9UGV2 375 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms