RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 IP6K3Q96PC2 410 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 GAGE10A6NGK3 116 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CYB5R3P00387 301 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 VWA2Q5GFL6 755 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF385CQ66K41 422 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 SLC25A26Q70HW3 274 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CARFQ8N187 725 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 ELSPBP1Q96BH3 223 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 OR2D2Q9H210 308 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 MED29Q9NX70 200 aa8.97□□□□□ -0.97
COL4A6-208ENST00000538570 SOX21Q9Y651 276 aaPredicted RBP8.97□□□□□ -0.97
COL4A6-208ENST00000538570 IGHV3-15A0A0B4J1V0 119 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 DDTP30046 118 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 ACVR1Q04771 509 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF77Q15935 545 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 MIDNQ504T8 468 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 C11orf87Q6NUJ2 197 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 SARAFQ96BY9 339 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 FOXJ3Q9UPW0 622 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 HPP00738 406 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 FAHD1Q6P587 224 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 WFDC8Q8IUA0 241 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 C16orf52Q8NHV5 167 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 FAM131CQ96AQ9 280 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 LRFN3Q9BTN0 628 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 PECRQ9BY49 303 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 TRAPPC4Q9Y296 219 aa8.96□□□□□ -0.97
COL4A6-208ENST00000538570 TMEM265A0A087WTH1 108 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 SERPINE3A8MV23 424 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 CDS2O95674 445 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 EPXP11678 715 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 ATF1P18846 271 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 FUT6P51993 359 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 PJVKQ0ZLH3 352 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 FAM109BQ6ICB4 259 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 ABI3BPQ7Z7G0 1075 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 OR1N1Q8NGS0 311 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 C19orf43Q9BQ61 176 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 C6orf106Q9H6K1 298 aaPredicted RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 NUMA1Q14980 2115 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 HMX2A2RU54 273 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 FRG2CA6NGY1 282 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 ZBTB25P24278 435 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 THBS4P35443 961 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 GALR1P47211 349 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 C19orf57Q0VDD7 668 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 SMIM21Q3B7S5 101 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 PELI1Q96FA3 418 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 TAAR9Q96RI9 348 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 MRPL13Q9BYD1 178 aaKnown RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 ADGRL4Q9HBW9 690 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 NCBP2LA6PVI3 153 aaKnown RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 CXCL13O43927 109 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 FCMRO60667 390 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 EMP1P54849 157 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 BTG2P78543 158 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM128Q5BJH2 165 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 TCTN3Q6NUS6 607 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 EIF4E3Q8N5X7 224 aaKnown RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 OR52N4Q8NGI2 321 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 OR10C1Q96KK4 312 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 OR8B4Q96RC9 309 aa8.96□□□□□ -0.98
COL4A6-208ENST00000538570 WDR61Q9GZS3 305 aaKnown RBP8.96□□□□□ -0.98
COL4A6-208ENST00000538570 RGPD5Q99666 1765 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 RGS13O14921 159 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 FZD6O60353 706 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 HAND1O96004 215 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 RPS27P42677 84 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 PNLIPRP2P54317 469 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CLDN15P56746 228 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 C17orf78Q8N4C9 275 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SMIM4Q8WVI0 70 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 MOB3AQ96BX8 217 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CHST6Q9GZX3 395 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CXCL16Q9H2A7 254 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ZNF275Q9NSD4 429 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 WASHC3Q9Y3C0 194 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ZNF785A8K8V0 405 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 CRYBA1P05813 215 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 DAOP14920 347 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 UBE3DQ7Z6J8 389 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ACY3Q96HD9 319 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ZPBPQ9BS86 351 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 NUP98P52948 1817 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 TMEM210A6NLX4 147 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 H0Y8X5 98 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ZNF250P15622 560 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 S100A4P26447 101 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 BSGP35613 385 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 OR3A1P47881 315 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 FHITP49789 147 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SUCLG1P53597 346 aaKnown RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ANKRD34AQ69YU3 496 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 GLDNQ6ZMI3 551 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-208ENST00000538570 FBXL6Q8N531 539 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 SPPL3Q8TCT6 385 aa8.95□□□□□ -0.98
COL4A6-208ENST00000538570 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms