RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ISG15P05161 165 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 PIPP12273 146 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 CFHR2P36980 270 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 GPM6AP51674 278 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 DVL1P1P54792 670 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 GNG3P63215 75 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM244Q5VVB8 128 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 PLCXD3Q63HM9 321 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 WDR82Q6UXN9 313 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 KCTD8Q6ZWB6 473 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 OR5A2Q8NGI9 324 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 OR51F2Q8NH61 342 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 RPL3LQ92901 407 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM80Q96HE8 168 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 GPR173Q9NS66 373 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM160Q9NX00 188 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 CNOT2Q9NZN8 540 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 PSORS1C1Q9UIG5 152 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 PCDHB10Q9UN67 800 aa19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 EXOSC1Q9Y3B2 195 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-204ENST00000535399 EFCAB10A6NFE3 127 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 ZNF732B4DXR9 585 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 LGALS8O00214 317 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 CDIPTO14735 213 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 PLPP2O43688 288 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 EGR1P18146 543 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 CD80P33681 288 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 MRPL28Q13084 256 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 BOLLQ8N9W6 283 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 DEFB108BQ8NET1 73 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 LRRC29Q8WV35 223 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 TMEM186Q96B77 213 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 OR51I2Q9H344 312 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 CLEC2DQ9UHP7 191 aa19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 CAB39Q9Y376 341 aaPredicted RBP19.02■□□□□ 0.64
SFSWAP-204ENST00000535399 OR5B21A6NL26 309 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 CRLF1O75462 422 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 WNT2P09544 360 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 TGM4P49221 684 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 GBX2P52951 348 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 RIPPLY3P57055 190 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 ST3GAL4Q11206 333 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 OR2G6Q5TZ20 316 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 SFRP4Q6FHJ7 346 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 IZUMO2Q6UXV1 221 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 GLCCI1Q86VQ1 547 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 SCCPDHQ8NBX0 429 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 BPIFB6Q8NFQ5 453 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 OR10AC1Q8NH08 325 aa19.01■□□□□ 0.63
SFSWAP-204ENST00000535399 OOEPA6NGQ2 149 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 C3orf80F5H4A9 247 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 ZNF12P17014 697 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 MYL12AP19105 171 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 ZFP36P26651 326 aaKnown RBP19■□□□□ 0.63
SFSWAP-204ENST00000535399 SEC61A1P61619 476 aaKnown RBP19■□□□□ 0.63
SFSWAP-204ENST00000535399 C6orf141Q5SZD1 244 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 TMPRSS11AQ6ZMR5 421 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 HAVCR2Q8TDQ0 301 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 C10orf35Q96D05 121 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 PLEKHA1Q9HB21 404 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 FKBP14Q9NWM8 211 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 HIF1ANQ9NWT6 349 aa19■□□□□ 0.63
SFSWAP-204ENST00000535399 TRAV20A0A0B4J274 112 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 ANKRD61A6NGH8 418 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 TNFRSF13BO14836 293 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 MYF6P23409 242 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 CPT2P23786 658 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 GTF2A1P52655 376 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 CR1LQ2VPA4 569 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 TEX36Q5VZQ5 186 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 LYPD2Q6UXB3 125 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 DCDC5Q6ZRR9 648 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 AHSA2Q719I0 299 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 ZNF676Q8N7Q3 588 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 OR10Z1Q8NGY1 313 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 ADAT3Q96EY9 351 aaPredicted RBP18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 ANKRD60Q9BZ19 345 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 MIOXQ9UGB7 285 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 HHLA2Q9UM44 414 aa18.99■□□□□ 0.63
SFSWAP-204ENST00000535399 TRAV38-1A0A0B4J264 116 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 PQLC2LA1A4F0 135 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 TMEM212A6NML5 194 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 KIAA1324LA8MWY0 1029 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 SRRM5B3KS81 715 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 FOXH1O75593 365 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 ZFPL1O95159 310 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 CCDC159P0C7I6 412 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 RPS2P15880 293 aaKnown RBP18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 HSPA13P48723 471 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 LCN2P80188 198 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 UBE2V2Q15819 145 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 XAF1Q6GPH4 301 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 FAM90A1Q86YD7 464 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 ZNF485Q8NCK3 441 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 OR51A4Q8NGJ6 313 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 OR52N1Q8NH53 320 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 RPS4Y2Q8TD47 263 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 CHST5Q9GZS9 411 aa18.98■□□□□ 0.63
SFSWAP-204ENST00000535399 TRIM36Q9NQ86 728 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms