RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 THRSPQ92748 146 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 RNF170Q96K19 258 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 SYT3Q9BQG1 590 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 CHST5Q9GZS9 411 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 DCSTAMPQ9H295 470 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 PLK3Q9H4B4 646 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 MSL2Q9HCI7 577 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 TCF7L1Q9HCS4 588 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 TMEM138Q9NPI0 162 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 GPR173Q9NS66 373 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 TAAR3PQ9P1P4 343 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 V9GY05 133 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 HCFC1P51610 2035 aa5.06□□□□□ -1.6
USP39-213ENST00000467885 DIDO1Q9BTC0 2240 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 UTP20O75691 2785 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 TENM4Q6N022 2769 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 COL12A1Q99715 3063 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 ZSCAN5BA6NJL1 495 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 ANKRD30BLA7E2S9 258 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 B9A039 149 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 HS3ST1O14792 307 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SULT1B1O43704 296 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 NCR1O76036 304 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 GOSR1O95249 250 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SOD3P08294 240 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 ACAA1P09110 424 aaPredicted RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 SLC2A2P11168 524 aaPredicted RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 ZNF20P17024 532 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 FSTP19883 344 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 RAB3BP20337 219 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 PRKACBP22694 351 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 CFPP27918 469 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 BDKRB2P30411 391 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 RBMXP38159 391 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 GNALP38405 381 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 PTGFRP43088 359 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SERPINB10P48595 397 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 RORCP51449 518 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SELENOVP59797 346 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 QRFPP83859 136 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 MXD1Q05195 221 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 KISS1Q15726 138 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 CNPY1Q3B7I2 92 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 C2orf76Q3KRA6 126 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 C11orf71Q6IPW1 123 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 USP43Q70EL4 1123 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 WDR86Q86TI4 376 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 COMMD2Q86X83 199 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 ZNF611Q8N823 705 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SPERTQ8NA61 448 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 BHLHE23Q8NDY6 225 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 Q8NFD4 153 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 OR13C9Q8NGT0 318 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 TSEN15Q8WW01 171 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 HPSE2Q8WWQ2 592 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 SLC25A46Q96AG3 418 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 FOXRED1Q96CU9 486 aaPredicted RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 C1orf147Q96MC9 270 aaPredicted RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 SPACA5Q96QH8 159 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 HIST1H2AAQ96QV6 131 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 NKX3-1Q99801 234 aaPredicted RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 SLIRPQ9GZT3 109 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 NXF2Q9GZY0 626 aaKnown RBP5.05□□□□□ -1.6
USP39-213ENST00000467885 SLC22A4Q9H015 551 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 OR51I2Q9H344 312 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 MS4A5Q9H3V2 200 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 CNTD2Q9H8S5 307 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 GPR160Q9UJ42 338 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 ZDHHC8Q9ULC8 765 aa5.05□□□□□ -1.6
USP39-213ENST00000467885 DOPEY1Q5JWR5 2465 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CADP27708 2225 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 MYO18BQ8IUG5 2567 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 IGKV1-12A0A0C4DH73 117 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SCO2A0A1W2PP80 73 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 FAM230AA0A1W2PPH8 454 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SMIM30A4D0T7 59 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CCDC160A6NGH7 325 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 IFITM5A6NNB3 132 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 NOTOA8MTQ0 251 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 C17orf100A8MU93 164 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ZNF732B4DXR9 585 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 F5H5P2 479 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 F8VVB4 439 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 F8VWA3 439 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 OVOL3O00110 214 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 CTDSP2O14595 271 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 PDCD5O14737 125 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 LDLRAD4O15165 306 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 SPRY3O43610 288 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 TIMM8AO60220 97 aaPredicted RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 NOS1APO75052 506 aaPredicted RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 LHBP01229 141 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 IGKV1D-12P01611 117 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 IGHV1-46P01743 117 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
USP39-213ENST00000467885 CFHR2P36980 270 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ALDH3B1P43353 468 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 RBP2P50120 134 aa5.04□□□□□ -1.6
USP39-213ENST00000467885 ZNF81P51508 661 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms