RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 TMEM33P57088 247 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 HNRNPA0Q13151 305 aaKnown RBP16.1■□□□□ 0.17
USP11-205ENST00000467378 CDK5R1Q15078 307 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 HFEQ30201 348 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 TMEM42Q69YG0 159 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 ZNF676Q8N7Q3 588 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.1■□□□□ 0.17
USP11-205ENST00000467378 OR10AC1Q8NH08 325 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 CCL17Q92583 94 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 PIMREGQ9BSJ6 248 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 FGF23Q9GZV9 251 aaPredicted RBP16.1■□□□□ 0.17
USP11-205ENST00000467378 ABCB9Q9NP78 766 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 PPP1R3CQ9UQK1 317 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 ERGIC3Q9Y282 383 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 TENM1Q9UKZ4 2725 aa16.1■□□□□ 0.17
USP11-205ENST00000467378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.09■□□□□ 0.17
USP11-205ENST00000467378 IGHV3-64DA0A0J9YX35 117 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 A6NIN4 97 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 TMEM212A6NML5 194 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 MYL12BO14950 172 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 MT-ND2P03891 347 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 ZNF12P17014 697 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 RBMXP38159 391 aaKnown RBP16.09■□□□□ 0.17
USP11-205ENST00000467378 PMELP40967 661 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 NR4A2P43354 598 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 MPPED2Q15777 294 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 PRAMEF6Q5VXH4 476 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 WDR86Q86TI4 376 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 ZDHHC23Q8IYP9 409 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 OR8S1Q8NH09 359 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 OR5AK2Q8NH90 309 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 ZNF420Q8TAQ5 688 aaPredicted RBP16.09■□□□□ 0.17
USP11-205ENST00000467378 HPSE2Q8WWQ2 592 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 OR5P3Q8WZ94 311 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 PDCD1LG2Q9BQ51 273 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 BPESC1Q9GZL8 116 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 TRIM36Q9NQ86 728 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 C14orf119Q9NWQ9 140 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 DCAF16Q9NXF7 216 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 HHLA2Q9UM44 414 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 LSM2Q9Y333 95 aaKnown RBP16.09■□□□□ 0.17
USP11-205ENST00000467378 LRRC42Q9Y546 428 aa16.09■□□□□ 0.17
USP11-205ENST00000467378 ANXA2P2A6NMY6 339 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 EGR1P18146 543 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 MZT1Q08AG7 82 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 CEACAM21Q3KPI0 293 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 CLVS2Q5SYC1 327 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 DMKNQ6E0U4 476 aaPredicted RBP16.08■□□□□ 0.16
USP11-205ENST00000467378 MOB3CQ70IA8 216 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 PRSS48Q7RTY5 328 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 MOGAT3Q86VF5 341 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 OR51A4Q8NGJ6 313 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 ERGIC1Q969X5 290 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 C10orf35Q96D05 121 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 MICU1Q9BPX6 476 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 MND1Q9BWT6 205 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 YTHDF1Q9BYJ9 559 aaKnown RBP16.08■□□□□ 0.16
USP11-205ENST00000467378 COMMD4Q9H0A8 199 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 BLOC1S6Q9UL45 172 aa16.08■□□□□ 0.16
USP11-205ENST00000467378 NRASP01111 189 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 RPSAP08865 295 aaKnown RBP16.07■□□□□ 0.16
USP11-205ENST00000467378 GPR6P46095 362 aaPredicted RBP16.07■□□□□ 0.16
USP11-205ENST00000467378 CDH15P55291 814 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 ACSM1Q08AH1 577 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 ZNF181Q2M3W8 571 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 FAM76BQ5HYJ3 339 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 CEP78Q5JTW2 689 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 C11orf53Q8IXP5 236 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 OR1M1Q8NGA1 313 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 OR5A2Q8NGI9 324 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 Q8TCH9 128 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 RGP1Q92546 391 aaPredicted RBP16.07■□□□□ 0.16
USP11-205ENST00000467378 MSI2Q96DH6 328 aaKnown RBP16.07■□□□□ 0.16
USP11-205ENST00000467378 SMIM19Q96E16 107 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 RNF170Q96K19 258 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 OR5M11Q96RB7 305 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 RTL8AQ9BWD3 113 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 GPR173Q9NS66 373 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 MGAM2Q2M2H8 2515 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 TGP01266 2768 aa16.07■□□□□ 0.16
USP11-205ENST00000467378 IFNL4K9M1U5 179 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 PPIHO43447 177 aaKnown RBP16.06■□□□□ 0.16
USP11-205ENST00000467378 GRPP07492 148 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 TAS2R43P59537 309 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 GABARAPL2P60520 117 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 SLC3A1Q07837 685 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 DMRTC1Q5HYR2 192 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 ZFP41Q8N8Y5 198 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 FGGYQ96C11 551 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 ADAT3Q96EY9 351 aaPredicted RBP16.06■□□□□ 0.16
USP11-205ENST00000467378 HIST1H2AAQ96QV6 131 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 CCDC90BQ9GZT6 254 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 PLEKHA1Q9HB21 404 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 UFSP2Q9NUQ7 469 aa16.06■□□□□ 0.16
USP11-205ENST00000467378 CLDN25C9JDP6 229 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 TMEM178BH3BS89 294 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 PLPP2O43688 288 aa16.05■□□□□ 0.16
USP11-205ENST00000467378 EEF1B2P24534 225 aaKnown RBP16.05■□□□□ 0.16
USP11-205ENST00000467378 BDH1Q02338 343 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms