RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 DCUN1D4Q92564 292 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 APOBEC3DQ96AK3 386 aaPredicted RBP4.38□□□□□ -1.71
EPHA3-202ENST00000452448 TSSK2Q96PF2 358 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 PSMG3Q9BT73 122 aaPredicted RBP4.38□□□□□ -1.71
EPHA3-202ENST00000452448 TEX101Q9BY14 249 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 ARL6Q9H0F7 186 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 OR51J1Q9H342 316 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 IL23AQ9NPF7 189 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF226Q9NYT6 803 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 BAZ2BQ9UIF8 2168 aaKnown RBP4.38□□□□□ -1.71
EPHA3-202ENST00000452448 SH2B3Q9UQQ2 575 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 LAMP3Q9UQV4 416 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 RNF115Q9Y4L5 304 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 UBIAD1Q9Y5Z9 338 aa4.38□□□□□ -1.71
EPHA3-202ENST00000452448 TRIP11Q15643 1979 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 GREB1LQ9C091 1923 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 EXOC1LA0A1B0GW35 172 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 A0A1W2PRE2 83 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 G3V3Q6 166 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 DEGS1O15121 323 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HMGB3O15347 200 aaKnown RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MPZL2O60487 215 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BKO60814 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 NFATC1O95644 943 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MPIG6BO95866 241 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BJP06899 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ANKRD34CP0C6C1 535 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HKR1P10072 659 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PGAM2P15259 253 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 FBLP22087 321 aaKnown RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 NFYAP23511 347 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BOP23527 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BBP33778 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 GLRXP35754 106 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ATP1B3P54709 279 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 WNT3AP56704 352 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BDP58876 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 RAP2BP61225 183 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BCP62807 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ID3Q02535 119 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H1AQ02539 215 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF154Q13106 437 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 EIF2B1Q14232 305 aaKnown RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PRSS8Q16651 343 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST2H2BEQ16778 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 BCL2L15Q5TBC7 163 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PWWP2BQ6NUJ5 590 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 Q6ZVH6 145 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 BEST3Q8N1M1 668 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 TCTEX1D1Q8N7M0 179 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PTGR2Q8N8N7 351 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR4K5Q8NGD3 323 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR56A4Q8NGH8 313 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR51G2Q8NGK0 314 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR2Y1Q8NGV0 311 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR5W2Q8NH69 310 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 Q8WTZ3 238 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 BLNKQ8WV28 456 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BHQ93079 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 FGGYQ96C11 551 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 CCDC115Q96NT0 180 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 DDOQ99489 341 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 GPR22Q99680 433 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PITX2Q99697 317 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 TIMP4Q99727 224 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BNQ99877 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H2BMQ99879 126 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 NMNAT2Q9BZQ4 307 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 FNDC4Q9H6D8 234 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 SEC61A2Q9H9S3 476 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MEPEQ9NQ76 525 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 C20orf141Q9NUB4 165 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MRPS18AQ9NVS2 196 aaKnown RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ASB6Q9NWX5 421 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 JKAMPQ9P055 326 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MARCH2Q9P0N8 246 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 PLEKHB1Q9UF11 243 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 NAT8Q9UHE5 227 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 COQ4Q9Y3A0 265 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 WSB1Q9Y6I7 421 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 TANC1Q9C0D5 1861 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 COL2A1P02458 1487 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 CHD3Q12873 2000 aaKnown RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MAP1LC3B2A6NCE7 125 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
EPHA3-202ENST00000452448 MCRIP1C9JLW8 97 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 F5H6K3 240 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 KIR2DS3K7RE56 304 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 HLA-HP01893 362 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 IFNW1P05000 195 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ADRA2AP08913 450 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 SULT1A3P0DMM9 295 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 SULT1A4P0DMN0 295 aa4.37□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF19P17023 458 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms