RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 C16orf87Q6PH81 154 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC25A47Q6Q0C1 308 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 C19orf48Q6RUI8 117 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ASB18Q6ZVZ8 466 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 DCXRQ7Z4W1 244 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CEACAM19Q7Z692 300 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 COMMD2Q86X83 199 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CROCCP3Q8IVE0 287 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF679Q8IYX0 411 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 TEX19Q8NA77 164 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZFP62Q8NB50 900 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF485Q8NCK3 441 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR5AK2Q8NH90 309 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ABHD3Q8WU67 409 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ROBO4Q8WZ75 1007 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GHSRQ92847 366 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SNAPC3Q92966 411 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 BORCS5Q969J3 196 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM54Q969K7 222 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MCHR2Q969V1 340 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 INTS12Q96CB8 462 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLAMF6Q96DU3 332 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 FBXO17Q96EF6 278 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ALKBH3Q96Q83 286 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2M2Q96R28 347 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 KCNS3Q9BQ31 491 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF649Q9BS31 505 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MED18Q9BUE0 208 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ABHD6Q9BV23 337 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 RBM24Q9BX46 236 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MMP27Q9H306 513 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 TPK1Q9H3S4 243 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 C1orf198Q9H425 327 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CALHM2Q9HA72 323 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 ELOVL3Q9HB03 270 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 PLGRKTQ9HBL7 147 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SCRT2Q9NQ03 307 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 POLE4Q9NR33 117 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MRPL22Q9NWU5 206 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 GLTPQ9NZD2 209 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 C1RLQ9NZP8 487 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 MRM2Q9UI43 246 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 NOSIPQ9Y314 301 aaKnown RBP3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CMAHPQ9Y471 501 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIPGQ9Y5X9 500 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 FLVCR1Q9Y5Y0 555 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 PEX16Q9Y5Y5 336 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 SEC16AO15027 2179 aa3.28□□□□□ -1.88
HMGB3P20-201ENST00000417997 PCNX2A6NKB5 2137 aa3.28□□□□□ -1.89
HMGB3P20-201ENST00000417997 PHF3Q92576 2039 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGKV1D-43A0A0B4J1Z2 117 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 IQCMA0A1B0GVH7 501 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1B0GVI7 797 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACOD1A6NK06 481 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC22A20A6NK97 555 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ANXA2P2A6NMY6 339 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF716A6NP11 495 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM25AB3EWG3 89 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM25CB3EWG5 89 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FAM25GB3EWG6 89 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TAF4O00268 1085 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 DOK2O60496 412 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPL33O75394 65 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 UPK3AO75631 287 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CEACAM4O75871 244 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FARS2O95363 451 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CD2P06729 351 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OCM2P0CE71 109 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 UBCP0CG48 685 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PSKH1P11801 424 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAB3BP20337 219 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 NPR2P20594 1047 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACHEP22303 614 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CDAP32320 146 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CX3CR1P49238 355 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 UCNP55089 124 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LSM6P62312 80 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PPP3R1P63098 170 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SCRN3Q0VDG4 424 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ODF4Q2M2E3 257 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 EIF2S3LQ2VIR3 472 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CEACAM16Q2WEN9 425 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 Q499Y3 187 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACSM3Q53FZ2 586 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 WDR38Q5JTN6 314 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TEX30Q5JUR7 227 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 C10orf128Q5T292 105 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 IDNKQ5T6J7 187 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 DDI2Q5TDH0 399 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CD200R1LQ6Q8B3 271 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CORO6Q6QEF8 472 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGFL2Q6UWQ7 119 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF704Q6ZNC4 412 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CFAP77Q6ZQR2 320 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LINC00299Q6ZSB3 139 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ABHD12BQ7Z5M8 362 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LUZP2Q86TE4 346 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TPRA1Q86W33 373 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms