RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 CMTM4Q8IZR5 234 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 TCEANCQ8N8B7 351 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 GATAD2BQ8WXI9 593 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 LYZL4Q96KX0 146 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 RAB3IPQ96QF0 476 aaPredicted RBP12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 PCGF1Q9BSM1 259 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 CLN6Q9NWW5 311 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 DNAJB11Q9UBS4 358 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 ENPP5Q9UJA9 477 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 RPUSD1Q9UJJ7 312 aaKnown RBP12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
NIF3L1-205ENST00000409588 TENM1Q9UKZ4 2725 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 A0A1B0GUS0 222 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 A0A1B0GVI7 797 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 CCDC182A6NF36 153 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF670-ZNF695F2Z2N8 137 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 IGLV3-1P01715 115 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 MMP9P14780 707 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 HCCSP53701 268 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 SLC9A3R2Q15599 337 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 AWAT1Q58HT5 328 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF322Q6U7Q0 402 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 METAP1DQ6UB28 335 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 Q6YL49 198 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 KCTD8Q6ZWB6 473 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 KIR3DL3Q8N743 410 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 CCDC54Q8NEL0 328 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 OR8J1Q8NGP2 316 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 TRUB1Q8WWH5 349 aaKnown RBP12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 RFKQ969G6 155 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF48Q96MX3 618 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 ZNF747Q9BV97 191 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 IKZF2Q9UKS7 526 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 CAB39Q9Y376 341 aaPredicted RBP12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 SNX5Q9Y5X3 404 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 POMT1Q9Y6A1 747 aa12.03□□□□□ -0.48
NIF3L1-205ENST00000409588 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 NKX6-3A6NJ46 265 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 DLGAP1O14490 977 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 DHRS3O75911 302 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 OR2T7P0C7T2 308 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 EGR1P18146 543 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 CXCR4P61073 352 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 CSNK2BP67870 215 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 WDR38Q5JTN6 314 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 STUMQ69YW2 141 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 SHISA2Q6UWI4 295 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF788Q6ZQV5 615 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 COMMD2Q86X83 199 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ELMOD2Q8IZ81 293 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 OR2T27Q8NH04 317 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 C8orf46Q8TAG6 207 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 TBC1D15Q8TC07 691 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ST8SIA4Q92187 359 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 CCL13Q99616 98 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 RBM4BQ9BQ04 359 aaKnown RBP12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 SIRPDQ9H106 197 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 RASSF4Q9H2L5 321 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 OR51I2Q9H344 312 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ADGRL4Q9HBW9 690 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 SMURF1Q9HCE7 757 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 GPR84Q9NQS5 396 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 ACOXLQ9NUZ1 547 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 R4GMQ9 66 aa12.02□□□□□ -0.49
NIF3L1-205ENST00000409588 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 IGHV3OR15-7A0A075B7D8 119 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF732B4DXR9 585 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 LOC110117498-PIK3R3F6TDL0 507 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 SULT1C4O75897 302 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 NRASP01111 189 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 IGHV1-69P01742 117 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 MRPL3P09001 348 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 GPM6AP51674 278 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 CAV3P56539 151 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ARF6P62330 175 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF684Q5T5D7 378 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 Q6ZSR3 168 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF573Q86YE8 665 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC35F2Q8IXU6 374 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 ANGPTL6Q8NI99 470 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 HPSE2Q8WWQ2 592 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 LRTOMTQ8WZ04 291 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 RPL3LQ92901 407 aaKnown RBP12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 TMIGD2Q96BF3 282 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 C1orf147Q96MC9 270 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 MYCBPQ99417 103 aaPredicted RBP12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 DCTN5Q9BTE1 182 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 NLKQ9UBE8 527 aa12.01□□□□□ -0.49
NIF3L1-205ENST00000409588 PIGLQ9Y2B2 252 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms